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Detailed information on CNT30597864


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30163577Fraxinus excelsiorPistacia vera8.9422.9884.8125reverse complement
CNT3091529Fraxinus excelsiorSolanum tuberosum8.330.1381.9116reverse complement
CNT30314232Fraxinus excelsiorCamelina sativa8.331.9683.62116reverse complement
CNT3037338Fraxinus excelsiorCucumis melo8.9431.0984.8125reverse complement
CNT30604860Fraxinus excelsiorOryza punctata7.8724.7781.82110reverse complement
CNT3049161Fraxinus excelsiorCucumis sativus7.6530.5786.92107reverse complement

Expression of CNT30597864

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFISCNNYLNTCYIIYYLNTCSGLVKFPMSNAIC*

>peptide 2 (30 aa)
MVVGLRQSFLVLSFICVWQWPGDKLAIDMY*

>peptide 3 (31 aa)
MLFFYLRCFQQLLLLKRKNATNSFILFSSSK*

>peptide 4 (55 aa)
MQPTLSYSFLHLNDTYRLIDRLVLHHLHHGSTWDPLFCLLPLLCNSSLTPVIFPF*

Sequence

>CNT30597864
CCAACTTTCAACCATAATTTCTCATTCATATTGAAATGATTTTTCACAATTAAATATTCTACACTCATCTACTCGGAACGTAGAATTTAATTGAACATTT
ATTTCGACAATTCGAACATTGGGTCCCACTTAAAATTGTGGTCAAAGTTGACCCATTTGGCACCATTTCCAACATTTTGTATAAGCTAGAAGTTGAAGGC
TTTGATTAAGTATGCTAGTCGTCTGAATGTAAATCGTCTCAATGTTTATAGTGCTTCTAATATGCTGAATGATTAATGTTTATTTCTTGTAATAACTATC
TGAACACTTGTTACATCATTTACTATCTGAACACTTGTAGTGGTTTGGTAAAATTTCCCATGTCAAATGCAATTTGTTAAAAAGGAACTTGTGCTGAAAT
CCCCAACCTATTGACCAGTGAATTTCCATCATTTTCTGTATGTTTTTATTCGTGAGGGAACTTGGAAGAAAATTGACCAGTGAATTGAATGAAAGTGGTA
GACTTAGAACTTACAAGTAGCTGATTGGATGAAAGTAGTAAGCTAAATGTTATTTTTCTACTTAAGGTGTTTTCAACAACTACTTCTGTTAAAGAGGAAA
AATGCAACCAACTCTTTCATACTCTTTTCTTCATCTAAATGATACTTACAGATTGATAGATAGGTTGGTTCTCCATCATCTGCATCATGGAAGCACGTGG
GATCCCCTTTTCTGTTTACTTCCTCTGTTGTGTAATTCCAGTTTGACACCTGTCATTTTTCCGTTCTGATTTCCGGGTTTTTTCATCTGTTGGGGTTCCT
TCTTAGCTATAATTTATTGATGCATTGTCTGCTTCAAGTATTTCAAAAAATTATTGGCTTCATTCTTTTTTTTATCATGTGATCATTTATTTAGTAGACA
TCATAATATCATATTAATTACTGACTTTATTCCTCTTTTCTATAGAGCCAACGCACAACAGCCAAAGCTCTTTGTTGGAATGATTCTTATTCTCATTTTT
GCCAAAGCTTTGGCTCTTTATGGTCTTATTGTCGGCATTATTCTCTCTTCTCGTGCTGGTTAGTCAAGAGCAGACTAGACGAGGGCATTTAGCTTGAGAT
TGCTGTCTGTTTCTTGGTATGAAATGGTTGTTGGACTACGACAGAGTTTCTTAGTTTTGAGCTTTATCTGTGTGTGGCAATGGCCAGGCGATAAGTTAGC
TATTGATATGTACTGAAGATAGATGTAGATGGATTCTAGTTCTCCCCCCTTAATAAATTTGTTTTTGAGTACTATATAGAATGTGGTATCTTGCTAGAAC
CAGATTTGATTTTTGAAGCCATTGTTTGTATTGTCATTATTTTGTTTTTACAAGTTCAATCCACAAGTGGAATTTATTGAGCATATGCTTAAAATTAA