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Detailed information on CNT30597791


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700733Fraxinus excelsiorQuercus lobata30.7721.8584.7892forward
CNT30281985Fraxinus excelsiorChenopodium quinoa22.742.8588.2468forward
CNT30381286Fraxinus excelsiorManihot esculenta35.7914.1382.24107forward
CNT30524888Fraxinus excelsiorPhaseolus vulgaris25.0819.798475forward
CNT30628726Fraxinus excelsiorVigna unguiculata22.746.1985.2968forward
CNT30196012Fraxinus excelsiorPisum sativum22.746.3285.2968forward
CNT30485883Fraxinus excelsiorOlea europaea23.4124.1498.5770forward
CNT3087863Fraxinus excelsiorVigna radiata22.747.2285.2968forward
CNT30143557Fraxinus excelsiorMedicago truncatula40.4711.5680.99121forward
CNT30610059Fraxinus excelsiorGossypium raimondii25.7511.2785.7177forward
CNT30647274Fraxinus excelsiorRosa chinensis29.775.1283.1589forward
CNT30355925Fraxinus excelsiorLactuca sativa32.4421.6585.5797forward
CNT30645210Fraxinus excelsiorCannabis sativa36.7914.5386.36110forward
CNT30114130Fraxinus excelsiorFicus carica23.7511.3185.9271forward

Expression of CNT30597791

Peptides detected in this lncRNA

>peptide 1 (53 aa)
HNFPHDIFIIVALLATFLEIRPNILRATRIVYQTGKLCSTTVSTVRPGTSFRR*

Sequence

>CNT30597791
CCATAATTTCCCCCATGATATTTTCATTATAGTAGCATTACTTGCAACATTCTTAGAAATTCGTCCTAACATATTACGTGCAACACGAATTGTGTATCAA
ACTGGCAAACTATGCAGCACCACAGTCTCAACTGTCAGGCCCGGAACATCTTTTAGGAGATGAAATGTTAGTCCCACTTCACGTAAATGTCCATCAATTG
CACCATCACTATCTGGAAGCATAGTTTGAGCAGCTGAAACCATCTGAAAAAGTGGTTTCTCAACCCCGACCACAGGGTCGGAACCGACTATAACAGCAG