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Detailed information on CNT30597673


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-45

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-38

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488054Fraxinus excelsiorOlea europaea50.9748.8988.57420forward

Expression of CNT30597673

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKGRLFLDVVVRQGTAILKLLPSEDKPLLVWRNTLLVLDLCLDIINSV*

Sequence

>CNT30597673
CTCTATAGTTGCTAAATATCATCCCTAAAGAGCAAGAAGCAGCAGTCTACCCTCCAGAAATATTTTAAGAACAAAATCTATCCATGATGTTATTGCACGT
TGTTGGCATTCATCAAACAAATAACTAAAAATATACAGCATATTGAGGACCGAGTGTGCAAAACTAACTTTTATTCATAAATTTTGGGGAAACCCATGAA
CTTCCATTGCAACAAGAACATCAGATTTTAAAAGTTTCACATAAGCCATTCAAAAATGGCTAAAAACAACCATAGAACAAAACACAGAGACAACACAGAA
CCACTTGGGAGACTAATATCAGCAGCATAACATTCAGAAACCGCCACGGAGGCGGAGGACAAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCCGCC
AGGGTACGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGCCTCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCAA
TAGTGTCTGAGCTCTCCACCTCCAAGGTGATTGTCTTGCCTGTCAAGGTTTTCACGAAAATCTGCATCTGTATAGTTAAAACAAGACCCTATCAGAATTT
ATCTTGTTAAATCCTAAATGAGAATCAATCAGTACAGAAAATATATGACTCATATATAATTACTGACAAAAATAGCAAATCTAACCACATAAATTCATTG
ACTGAAAGATACAGAGCAAAAACGATTTGAACTATGAAAAATTAAATAGAATATATAATATATTGAAACATCCTCAAAAGAATTTATCTGATCATCTAAG
AATAATGAAAATCAAACGGTGCAT