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Detailed information on CNT30597231


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578456Oryza meridionalisOryza barthii25.613.9694.96139reverse complement

Expression of CNT30597231

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MVKEERRGVEVGNVNDDDDSDKGGASAMVTTIVTTEGPHRQRRRHG*

>peptide 2 (89 aa)
TEREADGGHMTPSLNPRGASVTSKGGGSSAPLSPLLLFSSPLLPSNPGGGGGVGAGSRMWQWSRRSGEGWRSAMSTMTMTVTREGPRRW*

Sequence

>CNT30597231
GACAGAGAGGGAGGCCGATGGTGGCCACATGACTCCCTCTCTCAATCCCAGAGGCGCCTCAGTGACAAGTAAGGGCGGCGGGAGCTCGGCTCCTCTCTCC
CCTCTTCTCCTCTTCTCATCCCCGCTTCTCCCCTCTAATCCCGGTGGTGGAGGTGGTGTCGGTGCGGGATCCAGGATGTGGCAATGGTCAAGGAGGAGCG
GCGAGGGGTGGAGGTCGGCAATGTCAACGATGACGATGACAGTGACAAGGGAGGGGCCTCGGCGATGGTGACGACGATTGTGACGACGGAGGGGCCTCAT
CGACAGCGACGACGACACGGATGAGTTCAGTGGCCCCTTCCTCATAAATCCACCTGGCCCTAAGGGGGGACGGAGAGGGGAGGCCGGTAGCAGCGTCGGC
GGCAGTGTGGCCCCTCGCTAGCGCGGTCCTCCCCTCCCTCCCTCCCTCCCTCCCTCTTCCTCTCAGACCCGCCCGGAGGGGGACGGAGGGTGGAGGCCGG
CCGTCACACAGCCCTCCCCTCCCTCCCTCCCTCTTCTTCTCAG