Detailed information on CNT30597221


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2QLY5|METE1_ORYSJ, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377828Oryza meridionalisArabidopsis thaliana21.9613.6289.3647forward
CNT30224666Oryza meridionalisHordeum vulgare46.7345.0589100forward
CNT30478263Oryza meridionalisArabidopsis halleri21.9613.5889.3647forward
CNT30358925Oryza meridionalisLactuca sativa29.4416.4985.7163forward
CNT30578422Oryza meridionalisOryza barthii91.1294.297.44195forward
CNT30333329Oryza meridionalisCynara cardunculus44.3919.6385.2695forward

Expression of CNT30597221

Peptides detected in this lncRNA

>peptide 1 (57 aa)
PFPTIASRDSRVVRDAARSSAQMLRPSTTPAKRYFPEGKPALLIRSRVLAPRIRSKP*

>peptide 2 (69 aa)
LSNNSLKRLKGGERCGKIISPDVASIHNTGKKVLSRGETSTLDKVKSLGSTDKVKTISSHAVQGFETTSL

Sequence

>CNT30597221
CCCTTTCCAACAATAGCCTCAAGAGACTCAAGGGTGGTGAGAGATGCGGCAAGATCATCAGCCCAGATGTTGCGTCCATCCACAACACCGGCAAAAAGGT
ACTTTCCAGAGGGGAAACCAGCACTCTTGATAAGGTCAAGAGTCTTGGCTCCACGGATAAGGTCAAAACCATAAGCAGTCACGCTGTTCAGGGATTCGAG
ACCACAAGCTTGTC