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Detailed information on CNT30597190


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697919Oryza meridionalisOryza sativa70.3644.3286.45273forward
CNT30578542Oryza meridionalisOryza barthii98.9776.9596.35384forward
CNT30551913Oryza meridionalisOryza brachyantha42.2734.2479.88164forward

Expression of CNT30597190

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MLICVPSSVAPHHSRAMATSCLPTLRPVKSLMSAAGAASSPSTMSSTYATFPSFRYPAISSSNW*

>peptide 2 (35 aa)
MPPSLPLGTQPFPPRTGSTCHRSQTQGTPPYAGAW*

Sequence

>CNT30597190
GACAAATGGGGTGCCCCCATTTCTGATATCTAAACAACTATAGTAGTACTCCTCGGTAATGCTAATTTGCGTACCGAGCAGTGTGGCACCGCATCACTCT
CGTGCGATGGCGACGAGCTGTTTGCCGACATTGCGGCCGGTGAAGAGCTTGATGAGTGCTGCCGGTGCCGCATCGAGCCCCTCGACGATGTCCTCCACGT
ATGCCACCTTCCCTTCCTTTAGGTACCCAGCCATTTCCTCCTCGAACTGGTAGTACCTGTCATAGAAGTCAAACACAAGGAACCCCTCCATACGCAGGCG
CTTGGTGACAATATAGAACAAATTTTTCACCCCCTCTGGCCGCTCTAGGTTGTACTGCGAGATCATCCCACATGCCACAATCCGGCCA