Detailed information on CNT30597171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531932Oryza meridionalisEucalyptus grandis39.7416.2692.4793reverse complement
CNT30193918Oryza meridionalisSecale cereale38.8914.8598.991reverse complement
CNT30438044Oryza meridionalisAegilops tauschii60.6855.04100142forward
CNT30479543Oryza meridionalisArabidopsis halleri23.0810.3892.5954reverse complement
CNT30336644Oryza meridionalisCynara cardunculus36.325.6584.7185reverse complement

Expression of CNT30597171

Peptides detected in this lncRNA

>peptide 1 (41 aa)
EERNEVRGRGAGKRVESIDREKQNEIRIWPLSPFSHGCFSE*

>peptide 2 (39 aa)
GRTKRSERPGGREKSRVDRPGEAKRNQDLAAFTIQPWML*

Sequence

>CNT30597171
GGAAGAACGAAACGAAGTGAGAGGCCGGGGGGCAGGGAAAAGAGTCGAGTCGATCGACCGGGAGAAGCAAAACGAAATCAGGATTTGGCCGCTTTCACCA
TTCAGCCATGGATGCTTTAGCGAGTGAACTAGGTTTTTATTTGAGAGCGAACTAGGTTTTTAGTGGTATTCCTTCTCGAGCTTCTATTTCTTCCGTTAAG
GGAGATTCGGGAAAAGATGGAATAGGAAGACCTG