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Detailed information on CNT30597163


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520776Oryza meridionalisSetaria italica33.529.5796.48199forward
CNT30524774Oryza meridionalisPhaseolus vulgaris28.6223.4582.94170forward
CNT30218668Oryza meridionalisKalanchoe fedtschenkoi30.9847.5584.78184forward
CNT30626924Oryza meridionalisDaucus carota27.9513.1683.73166forward
CNT30620812Oryza meridionalisCajanus cajan30.314.4979.44180forward
CNT30570674Oryza meridionalisVitis vinifera31.4819.8183.42187forward
CNT30101941Oryza meridionalisOryza rufipogon98.6570.1895.05586forward
CNT30116792Oryza meridionalisOryza nivara90.9183.9899.26540forward
CNT30113329Oryza meridionalisFicus carica31.3117.2787.63186forward

Expression of CNT30597163

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MAAGGRLRITMLSSEETKHHNGTEQKLPKGSF*

>peptide 2 (64 aa)
QTCCMHNFKRHKGHFQLQQTHELSTHRSPGNHIRTDNQNIGGFISSSQSSVASFLLSPLHKLKQ*

Sequence

>CNT30597163
AACAAACATGTTGCATGCACAACTTCAAAAGGCACAAAGGTCACTTCCAGCTTCAGCAAACACATGAACTGAGCACTCACAGATCACCAGGGAACCATAT
AAGGACAGATAACCAAAACATAGGAGGTTTCATTTCTTCTTCTCAAAGTAGTGTAGCATCTTTCCTTCTTTCACCATTACATAAGCTTAAGCAATAACAG
ATAACAAATCCTCCTCCTCCTCCTCTAGGTAAAATATTCAAACACAATACCCTTATAAGTACTTATTATTAGGAAAGTAGCGTGCATGGGCATAAATGGC
AGCGGGGGGCAGGTTAAGAATCACAATGCTGAGCAGCGAGGAAACAAAACACCATAATGGGACAGAGCAAAAGCTTCCGAAAGGGAGCTTTTAGGCAGAA
GGCTTCTCCCACTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCTGGGTCGTCCCTTCCGAAGTGACCGTAAGCCGCCGTCTTGAGGTAGCGTCCGTTGC
CGCCTTTCTTGAGGTCAAGGTTGATGATGATCATGCCAGGCCTGAAGTCGAAGTTCTCCTTCACAATCTTGAGGATCTCCTTGTCGGGGCGGGG