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Detailed information on CNT30597136


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524209Oryza meridionalisSetaria italica25.712.8392.44238forward
CNT30179070Oryza meridionalisSecale cereale17.8233.689.7165forward
CNT30248558Oryza meridionalisAvena sativa24.6240.5788.6228forward
CNT304860Oryza meridionalisZea mays24.4179.0292.04226forward
CNT30365375Oryza meridionalisSorghum bicolor24.8441.2291.74230forward
CNT30620724Oryza meridionalisCajanus cajan15.3322.1282.39142forward
CNT30117867Oryza meridionalisOryza nivara101.9457.3294.28944forward

Expression of CNT30597136

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQQLIETSWGWEDWIGLDWIFIPARRRGR*

>peptide 2 (50 aa)
MCIKLKLPHSLITYNHQTQLTQSFHPKIEQRYVIRMFLGRVCYISGPRCT*

Sequence

>CNT30597136
AAAACAAACAAATTAGATGGGCGAGCGCAAAATAGCAGATTGTTTGAAAACGACTAGGATTCCATTGTGCATCCACTATCAAAGTGCTCGGCAAGTTGCA
TGACTGAACACAGGAAAAAAAATCCTCTACCACAGACTACCAGATCTATCATATTTAAAGAATTGCACTAAAGCACACTGAAAGACTCAAATTTTGTATC
GAATTGCTAATAAACAAAACAAGCTAGAAGACAAAGAGACATACATCCTTCCAAGATTTGCCTATTCCAAACAACCCCAACACCCCTCACCCAATTTAGG
CACTTATAGATATATGTGTATAAAGCTAAAGTTACCACATAGTTTAATCACATACAACCACCAAACCCAACTAACCCAGTCCTTCCATCCGAAAATAGAG
CAAAGATACGTCATTAGGATGTTTCTCGGCCGAGTATGCTATATTTCGGGACCAAGGTGTACCTAATAAGATCCAATCAACCAAAACCCCCCAGATCGGC
ATCCAATTCACTCTAAAACCCAACTCGGGATTACTCACCATCCAGATCCCCAAATCCAACCTTTACAGCAGACAGCAACGAAGCAAATGCCGGCGCACAG
AATTTTATCCCATTTCATTATTCATTTCTGAAATGCAACAACTAATCGAGACGAGTTGGGGGTGGGAGGATTGGATTGGATTGGATTGGATTTTTATACC
TGCGCGGCGACGAGGCCGCTGATGTGCGCCATGTCGCAGAGGAGCAGCGCCCCGACCTTGTCGGCGACGGCCCTGAGCTTGGCGTAGTCCCAGTCCCTCG
GGTACGCGCTGCCGCCACAGATGATGAGCTTGGGGCGGAAGTCGAGCGCCTTCTCCTCCAGCTTCTCGTAGTCGATGTACCCCGTGGCGGCGCTCACCTT
GTAGGGGAGGCTCTCGAAGTAGATCG