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Detailed information on CNT30597116


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675011Oryza meridionalisSetaria viridis6.6822.4391.6748forward
CNT30109656Oryza meridionalisOryza longistaminata43.6782.8598.41314forward

Expression of CNT30597116

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MDTSRRRWGSWALGGEVAPRVEHAPPHVAAPRRRRRRRRRRRRRRRHRR

Sequence

>CNT30597116
CTGAAAGTAGGGAAACACACGGCAGTATTTACACATGGAAGATGTTTACACACAAACACACTTCTTTGGGTTGTCGCTAGCCCTTGATAGGAGCCAGCAG
GCTAGCTGACACGTACCGGTCTCTGGTAGTACTAACAGAGACAGCAAGCTACTAGGAACAGAGTAACAAGATAAGATAGCAACATACTAGATAATTAATT
ACGTATTAGATAACCACAAGGACCAGCAAACGTGGCGTGACAGAGAGATCGACCAGCCTCCGATCAATGGGATTATTCAGTTCAGCGATGGCTGCTCCTG
GTCTCGTCGCTGTACAGCCTAGATGATGAGAAGATGAACAGGTCAATATGATGATTCAGTTCAATTTACCAATCATATATATGGAGATATAGATCGATGC
AGCTGTGGAATATATGGAGTATTAGTTCGGTCGAAATTTTTCAAAATTTTTAATTTTTTTCGTGAATTTTGATAATATTTGTTCAAAAATTTCGGTGAGA
TCCGATCAAATCGGCTAAACCGAAAGGTTTAACCCTGTGCAGCTGTGGATGAGCAAATTATAAGCAAAGCGATGGATACCAGTCGTAGACGGTGGGGGAG
TTGGGCTCTTGGTGGCGAGGTTGCTCCCCGGGTGGAACACGCTCCTCCACACGTTGCTGCCCCGCGGCGTCGTCGTCGCCGTCGTCGTCGGAGACGAAGA
CGACGGCGTCACCGGCGTC