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Detailed information on CNT30597113


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF89|CB5_ARATH, E-value = 2e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697144Oryza meridionalisOryza sativa5046.1895.2375forward
CNT30677012Oryza meridionalisSetaria viridis28.830.6483.33216forward
CNT30524410Oryza meridionalisSetaria italica28.827.6283.33216forward
CNT30184672Oryza meridionalisSecale cereale12.2727.8896.7492forward
CNT30295213Oryza meridionalisTriticum aestivum38.452.1786.11288forward
CNT30390869Oryza meridionalisTriticum turgidum15.4724.6897.41116forward
CNT30465769Oryza meridionalisSaccharum spontaneum2836.5282.86210forward
CNT30137065Oryza meridionalisLolium perenne3862.3682.11285forward
CNT30353507Oryza meridionalisEragrostis tef27.616.285.02207forward
CNT30365046Oryza meridionalisSorghum bicolor29.623.0583.33222forward
CNT30371307Oryza meridionalisOryza glumipatula59.7341.3797.54448forward
CNT30103835Oryza meridionalisOryza rufipogon62.5397.9197.65469forward
CNT30578121Oryza meridionalisOryza barthii45.7341.7897.08343forward
CNT30498372Oryza meridionalisDigitaria exilis28.444.8484.04213forward
CNT3039554Oryza meridionalisMarchantia polymorpha13.0726.7893.8898forward

Expression of CNT30597113

Peptides detected in this lncRNA

>peptide 1 (78 aa)
GNHSAMSTMMKTTSRQFTQVANISQPQIQTLGPSYQKIRMNRFFKSISKLDDNLHVHLTHSSTLLKLVPPSRVKLKLT*

>peptide 2 (51 aa)
KPFSNVNDDENHFETIYSGSKYFSATNPNTWSFLSEDQNEQVFQIHLQTRR*

>peptide 3 (42 aa)
MKNPSMENMASRPFLISFTFSSAAWSGSLASPSGLMGMLLPK*

Sequence

>CNT30597113
GGAAACCATTCAGCAATGTCAACGATGATGAAAACCACTTCGAGACAATTTACTCAGGTAGCAAATATTTCTCAGCCACAAATCCAAACACTTGGTCCTT
CCTATCAGAAGATCAGAATGAACAGGTTTTTCAAATCCATCTCCAAACTCGACGATAATTTACACGTACATTTAACACATTCTTCCACCCTTCTCAAACT
TGTCCCTCCTTCCCGGGTAAAATTAAAATTAACTTGAGGCCAGCTAGCGTCGCCGGCGGCGAGATGTTTACAGGCTGGGCGTCCTCTCGGCGGCGCCGGA
GATGACGGTGAGCAGGTTGTTGCCGAAGGGGTTCTCGACGGGGCCCTCGCCGGTGACGTAGGCCTGGATGAAGAACCCCAGCATGGAGAACATGGCCAGC
CGCCCGTTCTTGATCTCCTTCACCTTCAGCAGCGCCGCCTGGTCCGGGTCGCTCGCCAGCCCCAGCGGGTTGATGGGGATGCTGTTGCCGAAGTAGTTGA
GGGTGTTGCCGTCCAGGAGGAGGGCGCCGGTCTGCATATACCATGAGTGAGTTCACTTCAGAGATTCAGGTATTGAGCTTGAGTGATCAGTGAATTAGCT
GAATTGCCGATGATCAGTGGCTAGTACACGCACCTTGAACCAGACGGCCTCGGGGCCGCAGTTGGCGCCGAACTTGTTGCAGGCCTCGGGGATGATGAAC
CCGGCAGCGCCGAGCATCGCCCACCTGGCATGGATCAGCTCATAGGCCTG