Detailed information on CNT30597093


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001805, E-value = 1e-91

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575105Oryza meridionalisOryza barthii22.1212.294.39196reverse complement

Expression of CNT30597093

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MHPANRSLIAMGATCKTMHPQPTIESHFSWIIMTMKHGQMSQARSSF*

>peptide 2 (37 aa)
MSSDCDKTLHITPSSQAYHTSGFTPVPNGQWAVPSRA*

>peptide 3 (34 aa)
MGSPLSCLGESGSDRGRRRARPAPSRPPLPGSVG*

>peptide 4 (32 aa)
MVRCLKHAARSETNRSNTAIIPSTELLVIKHG*

>peptide 5 (31 aa)
MSSNASREPVLNCHGRDLQNHAPTAHHRIAF*

>peptide 6 (29 aa)
MAIRIVLLWSEVHNYTHKTQSTGMSPCHA*

Sequence

>CNT30597093
ATTAAATCTCCACTGATCAACGCTACACCACGTTGAACAGGCCCAACCAACCCACCTGAACTACAGTGCATTGGGTCGATTTATTAAGTGTGAGACTAAC
CACGGTGAATCTGGTCGATCGCCCATAACCACGGGCATGGCTATTCGAATAGTTTTACTCTGGTCAGAGGTGCACAACTATACCCACAAGACACAATCCA
CCGGCATGTCACCGTGCCATGCATGACACGTCACCATGTCGAGTGATTGTGACAAGACCCTTCATATAACCCCCTCTAGCCAAGCATACCACACCTCAGG
TTTCACCCCTGTCCCTAACGGGCAATGGGCAGTCCCCTCTCGTGCCTAGGTGAATCCGGAAGCGACAGAGGCCGTCGCAGGGCCCGCCCCGCTCCATCAC
GCCCACCCTTGCCTGGGAGCGTCGGCTAGAGAAAAGCTATACTACAGATCAAGCAGTTACCCATTCCCGCTTGTGGCAAGCGTTGTATGTCTTCCAATGC
ATCCCGCGAACCGGTCCTTAATTGCCATGGGCGCGACTTGCAAAACCATGCACCCACAGCCCACCATAGAATCGCATTTTAGTTGGATAATTATGACCAT
GAAACATGGTCAGATGTCTCAAGCACGCAGCTCGTTCTGAAACTAACAGGTCTAATACTGCAATTATCCCATCAACTGAGCTATTGGTAATTAAGCATGG
CTAAGCATATAGTTCTAGTTAGGTCACATAAGTAACACGAGCTAGTCGATTTATTACCTAAGGTAACAAAGAACGGATATCAAGTAAACATGACACAAGC
GAGCAAATAGGTAATACCCGGATCCCATGTAATTAGCAAAATAATGCATGTTTATTTGCAAACAGTAAAACATTTATAAAGTAGGC