Detailed information on CNT30597034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677136Oryza meridionalisSetaria viridis32.3314.2390.6775forward
CNT30394143Oryza meridionalisTriticum turgidum23.289.2892.5954forward
CNT30117954Oryza meridionalisOryza nivara57.339.61100133forward
CNT30551796Oryza meridionalisOryza brachyantha25.867.669060forward

Expression of CNT30597034

Peptides detected in this lncRNA

>peptide 1 (62 aa)
IQKAYRGLDKLIVVGTSADNHGDGHRLGGSSLAGATTLSLTQAFSLQSFLRGGVRSAATSQI*

Sequence

>CNT30597034
ATTCAGAAAGCATACCGCGGTCTTGACAAGCTCATCGTCGTAGGCACCAGCGCGGACAACCATGGAGACGGTCACCGGCTTGGGGGCAGCAGCCTGGCGG
GTGCTACTACCCTCTCCTTGACACAGGCCTTTTCTTTGCAGTCTTTCCTTAGAGGGGGGGTGAGAAGTGCAGCAACTTCTCAGATTTAAGGGCAAAAGGG
ATATGAGTTGTGAGGTGGAGGTTGGCCTCCTG