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Detailed information on CNT30597026


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007284, E-value = 5e-175

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30220734Oryza meridionalisHordeum vulgare70.198.9789.82226forward
CNT30103517Oryza meridionalisOryza rufipogon10014.9999.07322forward
CNT30575988Oryza meridionalisOryza barthii21.434.8798.5569forward

Expression of CNT30597026

Peptides detected in this lncRNA

>peptide 1 (40 aa)
DSLQFGFNPMELSSKHIFRRQSFLPYLNPAFTWRFGMRFL*

>peptide 2 (36 aa)
ILCNSASTRWSSLQNISFGVSLSCLTLTPLSRGDSV*

Sequence

>CNT30597026
GATTCTCTGCAATTCGGCTTCAACCCGATGGAGCTCTCTTCAAAACATATCTTTCGGCGTCAGTCTTTCCTGCCTTACCTTAACCCCGCTTTCACGTGGC
GATTCGGTATGAGGTTTCTCTGATCTGTTTACGGTATTCTTGAAGCTTTCTTTCTTGGTCACCGGACAGAGTGAGAACTGCTCTGCTTTCTTTCCCTAGC
ACACACTTAGTAGATAGTAGGCACAACTCCGCTAATAGCTCATCGAACTTGAGTTCTAGAGTAAGACCACAGCTCGATATGGCTCATTCACTAGTATGGT
TTACTATATGCCAGTGATAGAT