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Detailed information on CNT30596997


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103753Oryza meridionalisOryza rufipogon80.810096.04505reverse complement

Expression of CNT30596997

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MQCNGMYSCLHTQQGVKLHRITAIYDAVPVRLQP*

>peptide 2 (49 aa)
MQWYVLLPSHPTRCEAASYYGNIRCCTSTVATIGSRHNFKCNASDANAV*

>peptide 3 (37 aa)
MCICNAMICTPAFTPNRVNKCICNAMVCTPAFTPNKV*

>peptide 4 (49 aa)
MQAMQMQYEFQSITSEPHSFDGDQYKGIITKSIKYNYIQCKINKCDSDR*

Sequence

>CNT30596997
AGCAAGCAAACGGCTTTAACAAGCAACTTAAACCACAGGTGGATTATATAGTTAATTAAATACTAAGTTATGATTCACATAAAGACAAGTTGAATATCCA
TGGACTAAAAATATCATGACGTCACAACCCAAATCCATATACTCACAAATCCCAGAGAAGAAAACACTTCTCAAAGATATCTTCGATCGATAATTCTCAT
AATATCCTGCAATATGTGCATATGCAATGCAATGATATGTACTCCTGCTTTCACACCCAACAGGGTGAATAAGTGCATATGCAATGCAATGGTATGTACT
CCTGCCTTCACACCCAACAAGGTGTGAAGCTGCATCGTATTACGGCAATATACGATGCTGTACCAGTACGGTTGCAACCATAGGATCACGACATAACTTC
AAATGCAATGCAAGCGATGCAAATGCAGTATGAATTCCAGAGTATAACATCGGAACCACATTCCTTCGATGGAGATCAGTACAAGGGTATTATAACCAAG
AGCATAAAGTATAACTATATACAGTGTAAAATCAATAAGTGTGATTCAGATAGATAAATCCTCTGTGTAACAAATAATAATATATCGGTTGATGATATAT
AATTTCAAAGTGAAGGTAGAATAAA