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Detailed information on CNT30596904


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 1e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575801Oryza meridionalisOryza barthii60.8690.6288.01367forward
CNT30116235Oryza meridionalisOryza nivara81.5990.6185.57492forward

Expression of CNT30596904

Peptides detected in this lncRNA

>peptide 1 (35 aa)
KDEMQYVLIDAYTMRLIEYKLINQLYMQKEKHIYT*

Sequence

>CNT30596904
AAAAGACGAGATGCAGTACGTACTGATCGATGCATATACGATGAGATTGATCGAGTACAAATTAATTAATCAATTATATATGCAGAAAGAGAAACACATA
TACACGTAGACGAATGAAGCATGCATCGTGGAAGTGGAACTGAAGCATGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTGATACAT
ATGATGATTTGAACAAGGAACAAATGATAGTATTAGACATAGATAGATAGATATATAGTTGTACGTGGTGGTCGTTCACTCTCGTACGTGTAGCATATAG
CAAGCAGTGAAGTAGAATGGATGGAGCTGCAGGCTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGCTG
CAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTCGCGCACACCCCCAGCTTCAGCGTGTCGATCGGGCATCTTC
CTCCGCCGCCGCCTCCTCCTCCGCCGCCGCCTCCGCCGCTTCCTCCACCACCTGAACCCCCACCTGAACCTCCGCCGCTTCCTCCACCACCTGAACCTCC
GCC