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Detailed information on CNT30596867


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 3e-152

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395272Oryza meridionalisTriticum turgidum43.7649.7493.4470forward
CNT30470687Oryza meridionalisSaccharum spontaneum60.0680.9392.71645forward
CNT30574765Oryza meridionalisOryza barthii58.7571.1494.77631forward
CNT30582834Oryza meridionalisEchinochloa crusgalli60.1567.4392.11646forward

Expression of CNT30596867

Peptides detected in this lncRNA

>peptide 1 (30 aa)
VFRLYYIIRMVIFWDRWSICFQPNRDDQIR*

>peptide 2 (39 aa)
MVIRASPKSAEEVDGAARAITGEESAMVAAAIDALSCES*

>peptide 3 (37 aa)
MIKSANQNNGQISTKTISWETNKIIIAKTSSSSSSSS*

>peptide 4 (31 aa)
MRYPSTAPMSTTCTAQMARMLCAWIRLGLPR*

Sequence

>CNT30596867
GTATTTAGACTATACTACATAATCAGAATGGTTATATTTTGGGATCGATGGAGTATTTGTTTCCAACCTAATAGAGATGATCAAATCCGCTAATCAGAAT
AACGGACAGATAAGTACCAAGACCATCAGTTGGGAAACGAATAAAATCATTATTGCAAAAACATCATCTTCATCTTCTTCTTCTTCTTAGTGTACACAAC
ACCAACTCGATCATCATCTCGTCGCACCAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATTTCAACTACGCTCCCCTCTC
ACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAA
CGCCTCGGGGTCGTCGGCGAGGCCGAGCGGGTCGAAGGCGCCGCCGGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGGCCGCCGGCGATGCGGTACCCC
TCGACGGCGCCCATGAGCACCACCTGCACCGCCCAGATGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCGAGCCCCCCCTCGC
TGAAGATCTGCGAGCCCGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCGCCCAGCAT
CGCCCACCGGGAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCGGAGAGCCCCGCGGTGTCCCAGCCGTAGTCGCCCGGGAAC
TCGCCGGTGAGGTAGCTCGGCGGCTCGCCGGAGAGCGGGCCGAGGTAGAGGACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGCCGCCGGCTTGGGCT
TCGCGGCGGTCTTGCGCATGGTGATCCGCGCCTCGCCGAAGAGCGCGGAGGAGGTCGACGGCGCCGCGCGGGCCATCACCGGGGAGGAGAGCGCCATGGT
GGCCGCGGCCATTGATGCACTGAGCTGTGAGAGCTGAGAGAGATGGCGATGAGCGAGAGTGAGTTGGGAGTTGG