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Detailed information on CNT30596850


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 3e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692405Oryza meridionalisOryza sativa43.957096.43196forward
CNT30684877Oryza meridionalisTriticum urartu20.6314.5191.392forward
CNT30369831Oryza meridionalisOryza glumipatula23.5417.13100105forward

Expression of CNT30596850

Peptides detected in this lncRNA

>peptide 1 (39 aa)
EVELKHACIYISLIYGMKEEIDTYDDLNKEQMIVLDIDR*

Sequence

>CNT30596850
TGGAAGTGGAACTGAAGCATGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTGATACATATGATGATTTGAACAAGGAACAAATGAT
AGTATTAGACATAGATAGATAGATATATAGTTGTACGTGGTGGTCGTTCACTCTCGTACGTGTAGCATATAGCAAGCAGTGAAGTAGAATGGATGGAGCT
GCAGGCTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCA
CGTTTATCAGCCCATTCAGCACGTTCGCGCACACCCCCAGCTTCAGCGTGTCGATCGGGCATCTTCCTCCGCCGCCGCCTCCTCCTCCGCCGCCGCCTCC
GCCGCTTCCTCCACCACCTGAACCCCCACCTGAACCTCCGCCGCTT