Detailed information on CNT30596826


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108799Oryza meridionalisOryza longistaminata51.2949.6997.21896forward
CNT30102675Oryza meridionalisOryza rufipogon38.0788.998.35665forward
CNT30116524Oryza meridionalisOryza nivara43.9642.6796.22768forward

Expression of CNT30596826

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MELLLARWPFRRRSRTVEFFYQTTRTDLVSAPVLYIKRFWRQKNGFFLNIFFITPQERIFFVVPILYIKHILVVYI*

>peptide 2 (50 aa)
MRRKPSLLVAFSDSDHRLLPHFPKLHHKDEHGCMACRRLERAAAVTDPER*

>peptide 3 (45 aa)
MLIEIIAALTAGSLSSAPHSRSNPEADENSLKQRGSTTAASWHSF*

>peptide 4 (36 aa)
MALCSINCCDFKFIWRKNSGVELRGKPACEALGCAS*

>peptide 5 (38 aa)
MVDPSERRSVASTVLQNLWPFARLIAVILNSFGGRTAE*

>peptide 6 (43 aa)
MMPRLSAPPSAGTFPDYANRDHCRSDRRLLVIRSSLQIQPRGR*

>peptide 7 (31 aa)
MNRWAISSLRAYLRPLGKSVVASFGTNGGSE*

Sequence

>CNT30596826
CTTTCGTCCCTTCTTTCTTCAATCGTCTTCTAGACTTCTAGTTCTCATCTCCTAGCTTCAGATCCACCATTGCAGGCCAGAGAAACGAAGATTAGAGTTG
TTCTTTTAGATCCGGCCTCTTCCCCTTGCTCCTGTCACTGGATTGAGAGTTGGTCGTCGCGGGGCTGGGGTAGGTGGAGATGAGAAGGTTGGGGGGATGG
AGGAGATGGTGGCAGTAGCGGCCGGCATCGATGAATAGGTGGGCGATTTCCTCCCTGCGCGCGTATCTCCGTCCTCTAGGTAAATCCGTGGTGGCTTCCT
TTGGTACAAATGGTGGATCCGAGTGAAAGAAGGTCAGTAGCCTCTACGGTCCTCCAAAACCTATGGCCCTTTGCTCGATTAATTGCTGTGATTTTAAATT
CATTTGGAGGAAGAACAGCGGAGTAGAGCTGCGAGGCAAACCGGCGTGTGAGGCGCTTGGGTGCGCGAGCTAGAGACCGGATGAGGAGGAAGCCCAGCCT
GCTCGTCGCCTTCTCCGACAGCGACCATCGCCTTCTTCCGCATTTCCCCAAACTCCACCACAAGGACGAGCACGGCTGCATGGCGTGCCGGCGGCTAGAG
CGCGCCGCCGCCGTCACCGATCCGGAGCGATGATGCCCCGACTGTCGGCTCCTCCTAGCGCAGGGACTTTTCCGGATTATGCTAATCGAGATCATTGCCG
CTCTGACCGCCGGCTCCTTGTCATCCGCTCCTCACTCCAGATCCAACCCCGAGGCCGATGAAAATTCTCTGAAGCAAAGGGGTTCAACTACGGCAGCTTC
GTGGCATTCATTTTAACTAATTAAGCCCGTGTAAAGCATGCAAGGCAATGAAGCCTTTTTCATTTGACCAGAAGAAGCAACTTGTGCTGAGGTAGGTCTG
CTGTGGGGTGCTTCGCGTTGTGGATAGCGGTGTAGCTTGGGGCGATGGTGGTGGTCCGAGATGACATTTTATTTTCCTTGGTGGATCTGAATTTTTTGGC
GCGGACCAGAAGCTGATTATGTGGTTTCACTGGTCAAAATTGGTGATGCACTGAAGCATGTCTCTTACACATTGACGCATACTGCTCTCACATTCATTCT
CTCGGTATGTTAATTAGCTCTACTAAGAAAAGCTTCCTTAGCTTGTATTCGTCTTGTACATGCATTTATTTATGTAAGTGATCAAGGTTACCATTGTATG
TGTTAACTGAAACTTTGGTAGGATTATTTGACGCCATAGGTTGATATCCTCGTTCCATGATCCCATCTTGACCAACATGATTTTACCATTGCTTTTGGCA
AGTGTTTGGTAATCCGTAGAAGTTTCTTTTGACATATTGTTTGCTTCGAAGTACACGGTTAACATTGATTCTCAGCATCATCCCGGTCAAGTACTCCCTG
AATGCCCTGCTGTGCTCTTTTCAATAAAAGCACTCCTTGAATGTCTTGTTTGCCTCGATATGCAACCATGTATTTTGATGCAGCTTGAACTTATGTTTGT
TGATGATTGTCGTTGATGGAGCTGCTCCTGGCAAGGTGGCCTTTTAGGCGACGGAGTAGAACTGTGGAATTTTTTTATCAAACCACAAGAACTGATTTGG
TTTCTGCACCAGTTTTGTACATAAAACGTTTTTGGCGGCAGAAGAACGGATTTTTTTTGAATATTTTTTTTATCACACCACAAGAACGGATTTTTTTTGT
GGTACCAATTTTGTATATAAAACATATTTTGGTTGTATATATATAGG