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Detailed information on CNT30596794


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 6e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Oryza meridionalisOryza sativa74.2164.2397.36492forward
CNT30678303Oryza meridionalisSetaria viridis29.4154.7893.33195forward
CNT30522020Oryza meridionalisSetaria italica42.6859.794.35283forward
CNT30639185Oryza meridionalisNymphaea colorata28.8144.7383.77191forward
CNT30515464Oryza meridionalisJuglans regia35.7521.3580.59237forward
CNT30630888Oryza meridionalisVigna unguiculata26.8526.2983.71178forward
CNT30710333Oryza meridionalisGlycine max30.1722.9984.5200forward
CNT30122581Oryza meridionalisPhyscomitrium patens23.8322.4181.65158forward
CNT30299532Oryza meridionalisTriticum aestivum35.1445.6994.42233forward
CNT30395090Oryza meridionalisTriticum turgidum44.1927.2693.17293forward
CNT30554655Oryza meridionalisOryza glaberrima73.7655.8997.96489forward
CNT30440464Oryza meridionalisAegilops tauschii44.1935.393.52293forward
CNT30246994Oryza meridionalisAvena sativa42.0833.4194.27279forward
CNT30665854Oryza meridionalisTriticum dicoccoides44.1955.793.17293forward
CNT30228866Oryza meridionalisAnanas comosus35.4426.8988.51235forward
CNT30344027Oryza meridionalisEragrostis tef43.7435.8994.14290forward
CNT30619829Oryza meridionalisCajanus cajan29.4119.7884.1195forward
CNT30370885Oryza meridionalisOryza glumipatula103.1798.5691.96684forward
CNT30570681Oryza meridionalisVitis vinifera23.3811.3485.16155forward
CNT30148662Oryza meridionalisBrachypodium distachyon43.4437.489.24288forward
CNT30577354Oryza meridionalisOryza barthii68.0254.8797.78451forward
CNT30579362Oryza meridionalisEchinochloa crusgalli44.1933.695.22293forward
CNT30499040Oryza meridionalisDigitaria exilis31.6730.8890.48210forward
CNT30117441Oryza meridionalisOryza nivara73.7658.0897.96489forward
CNT30174623Oryza meridionalisVigna angularis39.0630.480.69259forward
CNT30113105Oryza meridionalisFicus carica29.4124.3888.72195forward

Expression of CNT30596794

Peptides detected in this lncRNA

>peptide 1 (29 aa)
NEHASKFTKHILQYYKEEIISHHRSITPS*

>peptide 2 (30 aa)
MNTHQNSPNIYYNIIKKRLYPTIDRLHHHE*

>peptide 3 (61 aa)
MMAAPPVGMERVDERGFAGARAARRWRVAAEACVAMAMVVGGGYRVVDSIRVEEREISEME*

>peptide 4 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 5 (55 aa)
MSAASPAPGRRGGGAWRRRLAWPWPWWWEEGTVWWIRFEWRRERYRRWSREKPKKK

Sequence

>CNT30596794
TAATGAACACGCATCAAAATTCACCAAACATATACTACAATATTATAAAGAAGAGATTATATCCCACCATCGATCGATTACACCATCATGAATAACTGAA
GAGCAGCCTGACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTACGAGAGAAGAAGAAGAAGTCTAGATGTCGA
AGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTTGACCTTCTC
CGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGATAGAACTGGTAGTTGATCTTGTACTTGGAGCGGAGCCTGGTG
CCCAGGGCCAGGCACTGCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATGGAGAGGGTGGATGAGC
GCGGCTTCGCCGGCGCCCGGGCGGCGAGGAGGTGGCGCGTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTGGGAGGAGGGTACCGTGTGGTGGA
TTCGATTCGAGTGGAGGAGAGAGAGATATCGGAGATGGAGTAGAGAAAAGCCCAAGAAAAAGA