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Detailed information on CNT30596734


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103985Oryza meridionalisOryza rufipogon14.4324.5299.02102forward
CNT30577445Oryza meridionalisOryza barthii13.7229.9498.9797forward
CNT30115939Oryza meridionalisOryza nivara41.5846.4597.96294forward
CNT30551809Oryza meridionalisOryza brachyantha43.1432.4188.2305forward

Expression of CNT30596734

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KCDTPLFTLPSPLSFWAHSPPLPVPSREINAE*

Sequence

>CNT30596734
AAGTGTGACACCCCTCTCTTTACTCTCCCTTCTCCTCTAAGCTTCTGGGCACATTCTCCGCCCCTCCCAGTCCCTTCCAGAGAAATAAACGCAGAGTGAG
AGCACCTCATTTCGCCCCATCTTCCTTCTTCCTCCTTGCCGGCCGAGAGAACTTCGTCGTCGCCGCCGTGTTTCTGTGAATCTCCGGGAACGCACATCTC
TTTTTGGAGGCCCGGGGCGCGGCCGGCGTCGTCGCGTCACCCAAGCTTCCAGTGTTCCCGATGTTCCAGGCCGAGATACAGGGTGGTGCTGCTCATTCTA
GTTCATCTTCCTCCCAGATGTAACACCGTCAAGAATCAGCCCAAGCCGAGCTCCAGGCGTGGAGAACGCTCGCCTTCTTTCCTCAGCCCCGATCTAGACC
CGTTGGTTTTGTTCCTCCCTGTCCGATCTAGTCGTTCTCGGGTCGTCATCGTGTTCGTTGTGTTGCCGGGCATCTCCAACGCCGTCGCTGCTTCCTGGAC
CTCTCCGACCCCTTTCAGCTGCACGATTCAGAGAATCCGGAGAATAACGAGCCATATCTAGAGGTTGAAAGTGACCAAGTGCAGCAGCAAGGCAAGCACC
TAAGCATATAGAACTTATGCTTTCTCAAAATGTTTTGTTTGTAATCTATACATATATATATATGCATGGGTTGGCTACTTATTAATATTGTTGGATTTGG
GTATGTG