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Detailed information on CNT30596725


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 3e-53

BLAST vs NONCODE:
NONZMAT001339, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Oryza meridionalisOryza sativa44.0259.3499.741519forward
CNT30677010Oryza meridionalisSetaria viridis24.6991.6193.78852forward
CNT30524664Oryza meridionalisSetaria italica26.8667.7198.71927forward
CNT30639555Oryza meridionalisNymphaea colorata43.0987.0695.431487forward
CNT30536068Oryza meridionalisEucalyptus grandis45.9946.0893.071587reverse complement
CNT30513456Oryza meridionalisJuglans regia46.0450.0694.021589forward
CNT30500477Oryza meridionalisCoffea canephora43.7882.9894.181511forward
CNT30269781Oryza meridionalisChenopodium quinoa45.9353.6492.931585forward
CNT30730500Oryza meridionalisCorchorus capsularis33.4797.394.721155forward
CNT30630109Oryza meridionalisVigna unguiculata46.3350.7393.311599forward
CNT30196858Oryza meridionalisPisum sativum45.0683.7492.541555forward
CNT30503447Oryza meridionalisNicotiana attenuata33.0968.2695.451142reverse complement
CNT3044711Oryza meridionalisPrunus dulcis14.08101.8994.44486reverse complement
CNT30638683Oryza meridionalisCapsicum annuum14.8199.0390.8511reverse complement
CNT3090649Oryza meridionalisSolanum tuberosum45.9658.0194.891586forward
CNT30186247Oryza meridionalisSecale cereale40.7198.899.431405forward
CNT30291213Oryza meridionalisTriticum aestivum59.258.8199.312043forward
CNT30225309Oryza meridionalisHordeum vulgare30.6987.8895.371059forward
CNT30400299Oryza meridionalisTriticum turgidum41.1266.5399.221419forward
CNT30588765Oryza meridionalisMusa acuminata17.5986.9695.72607reverse complement
CNT30511396Oryza meridionalisSolanum lycopersicum17.8267.2190.89615forward
CNT30552690Oryza meridionalisOryza glaberrima16.7537.7598.62578forward
CNT30444225Oryza meridionalisAegilops tauschii30.495.0298.951049forward
CNT30248027Oryza meridionalisAvena sativa28.1799.7997.63972reverse complement
CNT30668159Oryza meridionalisTriticum dicoccoides20.72100.1495.66715forward
CNT30310298Oryza meridionalisCamelina sativa29.6467.0895.411023reverse complement
CNT3062651Oryza meridionalisArabidopsis lyrata19.9782.8196.08689reverse complement
CNT30460907Oryza meridionalisSaccharum spontaneum59.8161.9499.712064forward
CNT30136065Oryza meridionalisLolium perenne18.72100.6297.99646forward
CNT303731Oryza meridionalisZea mays60.0492.0198.942072forward
CNT30655263Oryza meridionalisRosa chinensis44.9185.8791.741550forward
CNT30206724Oryza meridionalisHelianthus annuus42.9468.2995.551482forward
CNT30713553Oryza meridionalisMalus domestica golden15.0777.1593.46520forward
CNT30689042Oryza meridionalisTriticum urartu59.7271.5199.032061forward
CNT30720907Oryza meridionalisTriticum spelta29.5910099.611021reverse complement
CNT30154922Oryza meridionalisPrunus persica45.5593.0791.281572reverse complement
CNT30410430Oryza meridionalisPapaver somniferum42.6550.8894.091472reverse complement
CNT30646402Oryza meridionalisCannabis sativa31.8286.889.711098reverse complement
CNT30319706Oryza meridionalisAsparagus officinalis45.9355.1595.961585forward
CNT30332807Oryza meridionalisDioscorea rotundata40.9785.5996.041414reverse complement
CNT30148090Oryza meridionalisBrachypodium distachyon44.3152.6399.611529reverse complement
CNT30103033Oryza meridionalisOryza rufipogon44.8399.7498.061547reverse complement
CNT30576679Oryza meridionalisOryza barthii10.6970.2998.1369forward
CNT30585638Oryza meridionalisEchinochloa crusgalli22.850.8499.62787reverse complement
CNT30604668Oryza meridionalisOryza punctata12.5298.4196.53432forward

Expression of CNT30596725

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

>peptide 2 (38 aa)
MSRRLIGSGLVKGTEPTGAVAKASLHRAIVTAYGPEPG*

>peptide 3 (59 aa)
KGLRWIPRYPETRKGVASDEMLRGVENKHRSGDSQIGQPFELPAESMSRQETTWRTETS*

>peptide 4 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVKVGQ*

>peptide 5 (79 aa)
MSVKMRTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPSGGARAISEIPLWKSSDSNLVSDPRAKGQSQVDSFYGA*

>peptide 6 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

>peptide 7 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 8 (36 aa)
MSALSSDFPRASGSTAETATGSPPIRGWSDRSMEIG*

>peptide 9 (37 aa)
MVIGLRTQGDPAFSGVRRGRENASSRGPSTKRCSAEV*

>peptide 10 (32 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 11 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

Sequence

>CNT30596725
GGAAAGGCTTGCGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGA
TTCCCAAATAGGTCAACCTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAA
GCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGTGCTGCTAGGCG
AAGCGGTTGAGTGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCG
TGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCAGTGGGTA
GTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAGGGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGG
CAGTGGCTTGGTTAAGGGAACGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCT
ATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCA
CTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCTGCGCGA
GCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC
GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAG
CAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAA
ATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACAT
TGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGA
TGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTACGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGTTTAAGGACACAAGG
TGACCCTGCTTTTTCAGGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGCCCCGTGGACT
AGCCATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGCGCTGAAGTATGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAG
GGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACT
TCGGGAGAAGGGGTGCCCCCTCGCAAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATG
TATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGAACTGATGACAGGGAAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAA
CTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACG
AAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGACTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTAT
GAAGCTTTACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGTG
AGATACCACTCTGGAAGAGCTCGGATTCTAACCTTGTGTCAGACCCGCGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCA
AAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGACATTGGTCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACTCACCCGTCGA
GCAGAGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCC
CAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTNTAAAAGTTACTCTAGGGA
TAACAGGCTGATCTTCCCCAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTG
GGCTGTTCGCCCATTAATGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTT
TCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAGCCAAGTGCGGAGAGGATAACTGCTG
AAAGCATATAAGTAGTAAGNCCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAGC
CAAGTGCGGAGAGGATAACTGCTGAAAGCATATAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCTCCTCCGACTTCCCTAGAGCCTCCGGTAGCACAG
CCGAGACAGCGACGGGTTCTCCACCCATACGGGGATGGAGCGACAGAAGCATGGAAATAGGATAAGGTAGCGGCGAGACGAGCCGTTTAAATAGGTGTCA
AGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACGAACGAACGATTTGAACCTTGTTCCTACACGACCTGATCAAATCGATCAGGCACTTGCCA
TCTATCTTCATTGTTCAACTCTTTGATGAAAAGATGAAAAAACCAAAAAAA