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Detailed information on CNT30596720


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099863Oryza meridionalisOryza rufipogon26.0332.9296.99133forward
CNT30576507Oryza meridionalisOryza barthii34.2510.64100175forward
CNT30603960Oryza meridionalisOryza punctata30.1412.1895.45154forward

Expression of CNT30596720

Peptides detected in this lncRNA

>peptide 1 (67 aa)
LVPNRGLRRPAIPPKRICSFFLLFSPLPCILLVLHEMIEIRNCRQDISQTKNSLNKKKISKMDHREF*

Sequence

>CNT30596720
CTTGTGCCCAATAGAGGATTAAGAAGACCAGCAATCCCTCCTAAAAGGATTTGTTCCTTTTTTTTATTGTTCTCGCCCTTGCCTTGCATTCTCCTCGTTT
TGCATGAGATGATAGAAATAAGGAATTGCAGACAAGACATCTCGCAAACAAAAAATAGTCTAAACAAAAAAAAGATTTCCAAAATGGATCATAGAGAATT
CTAGCAATCGCCAATAAATCGCGGCTTTTTACCAACTTGATGGTAAGAAATCCCGGGACCTAGAAATTCATTTCGTACAATTGAACCTTTTCAAACTGTT
TCTTTTTGAGAACCAAAAAAACTTGTGCCAAAATAACGGATGCGAAGAAGAACAAAAGGCCTTGAACGCGTAATGGATCCTGAAGCACTATTTCTGCATC
CCCCTGACCAAACCCTCCCACATTAGGATTACTTGTTAATGGTTGATCAAGCTTGATCGATTCCCCCTCTGAAACAAGAAGTTCTGGACCGGGAGGTATA
AGATCAATCAC