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Detailed information on CNT3059672


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30542251Arabidopsis lyrataBrassica napus100.98100.9887.42310forward
CNT30237776Arabidopsis lyrataBrassica oleracea100.98100.9887.42310forward
CNT3076575Arabidopsis lyrataBrassica juncea100.3398.0984.74308forward
CNT30263689Arabidopsis lyrataBrassica rapa100.33100.3384.74308forward
CNT30478499Arabidopsis lyrataArabidopsis halleri100.33100.3395.78308forward

Expression of CNT3059672

Peptides detected in this lncRNA

>peptide 1 (62 aa)
SSLVTQACDPSGDNKGDGTLSRSHWAGFGLAFYWPAHSKSGVETCVLSEGSGLLFLRAEETA*

Sequence

>CNT3059672
GTCGAGCTTAGTAACGCAGGCTTGTGATCCAAGTGGAGACAACAAGGGTGATGGAACATTGAGTCGATCTCACTGGGCCGGGTTTGGTTTGGCTTTCTAC
TGGCCTGCCCATTCCAAGTCGGGAGTTGAGACCTGTGTCTTGAGCGAAGGCTCGGGGCTCTTGTTTCTTAGAGCGGAGGAGACCGCGTGAGGCTGGTTTC
ACAGAGCAGCGTCCACCTTCCTCTCTCGACGGTGGAAGGATAACGGGCCGGTGCCTTCCGAGCCCACTATGACCCATTAAGCCGACTCCATCTGGACCAT
CACTTTT