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Detailed information on CNT30596676


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670689Oryza meridionalisSetaria viridis49.1410.6492.11114forward
CNT30362056Oryza meridionalisSorghum bicolor47.4126.796.36110forward
CNT30576220Oryza meridionalisOryza barthii47.411196.36110reverse complement

Expression of CNT30596676

Peptides detected in this lncRNA

>peptide 1 (55 aa)
CLRGAGAGMFACWAECSPTSESSPLERNPCPPQQENGCAVXXXXXXXLGRVFAHF*

Sequence

>CNT30596676
CTTGCTTGCGCGGAGCCGGAGCCGGCATGTTCGCCTGCTGGGCCGAGTGTTCGCCCACTTCTGAGTCTTCGCCTTTAGAGAGAAATCCGTGTCCGCCCCA
GCAAGAAAACGGCTGCGCGGTTGNNNNNNNNNNNNNNNNNNNGCTGGGCCGAGTGTTCGCCCACTTCTGAGTCTTCGCCTTTAGAGAGAAATCCGTGTCC
GCCCCAGCAAGAAAACGGCTGCGCGGTTGCGT