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Detailed information on CNT30596622


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604377Oryza meridionalisOryza punctata56.4967.7990.42522forward

Expression of CNT30596622

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQWQAPNGSTVRGLISSSRCHYKLYYSLLTVHKLW*

>peptide 2 (35 aa)
MLYYKKHACSHATALRKHIDSHMDTPVNNTRQTHR*

>peptide 3 (31 aa)
QPRNSDTQGYMLFYSWYVRTYITHMHIYALL*

>peptide 4 (46 aa)
MSGTFAANAMASAKWKHSERIDLLISLSLQTLLLTPDSTQAVVARCV

Sequence

>CNT30596622
AACAGCCCAGAAATAGTGACACACAGGGATACATGCTCTTTTATTCATGGTATGTACGCACATACATAACACACATGCATATATATGCTTTATTATAAGA
AGCACGCCTGCTCACATGCAACAGCATTAAGAAAACACATAGATAGCCACATGGACACACCAGTGAACAACACACGACAAACACATAGATAGTCACTAGA
GCAATAGTACATACCAAAACTATGCGGAATCATACGTAGCAAACAACCAAGTCTACTCAGTTCTCGGGCACAATTATAGCTATTGCTGGTGAAAGAGGTG
GTGGCTTTGGCAGAGATGGCTCTGGCTGAGGCTTGGGTTCTGGCTTAGGATCAGGCTGTGGCTCCGGCTTGGGATTAGGATTTGGCTTGGGGTTAGGACT
CGGCTCAGGTTTGGGTTCTGGCTTTGGCTCCGGCTTAGGATTTGGGGTCGGCTCCGGCTGTGGCTTGGGCTTTGGATTTGGTTTTGGGTCAGCTTTGGGG
CTAGGTTGTGGGTTCGGTTGAGGATCTTGTTTTGGGTCAGGCTGTGGTGTAGGTTTCGGGTCAGGCTGTGGAGATGGTTTTGGATCCGATTGTGGGTTTG
GTTGAGGATTTTGTTTTGGGTCAGGCTGCGGTGATGGTTTTGGATCCGGCTGTGGGTTAAGTTGAGGGTTAGGCTGTGGACTGGGCTTTGTCTCTGGTTG
TGGTTTTGGTGTTGGGTCAGGTTTCGGCTTGGGATCTGCTGGCTTTGGATCAGATTTAGCTTCAATCACGCGTCCATTGGCAATGTCAGGAACATTTGCC
GCCAATGCAATGGCAAGCGCCAAATGGAAGCACAGTGAGAGGATTGATCTCCTCATCTCGTTGTCACTACAAACTCTACTACTCACTCCTGACAGTACAC
AAGCTGTGGTAGCTAGGTGTGTTG