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Detailed information on CNT30596580


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694963Oryza meridionalisOryza sativa26.0786.5583.61238forward
CNT30370781Oryza meridionalisOryza glumipatula42.527.593.04388forward
CNT30102507Oryza meridionalisOryza rufipogon49.5161.7588.72452forward
CNT30117205Oryza meridionalisOryza nivara51.1539.7888.87467forward

Expression of CNT30596580

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MHAVDTIKKYTNETKCRIWTYQSEWTSWWSSWFLPSRYQEMHLRNDRQLRLQWPALSSGCGG*

>peptide 2 (72 aa)
MKPNVESGRINLNGPLGGHHGFCPPVTRRCTSGMTGSSGFSGRRFLPAVVVDQVLAAYRDWVLVVGQALVAH*

Sequence

>CNT30596580
TATTTTCTTTCATCATGCGGTCAATGAATCGATGACAATGATGACTGATGAATGCAAGCGTGTGCTCATATACACAAATAATTGAATCCATTTATTGTAA
ACAAATATGAATATATGATCTCACACCCTCAGAGAAGAGATGTGAGCTCATAGCAACAAACTCAGCAAGTAACACACATCTACACAGATGACAGGCATGG
CATGCACGCCGTTGATACAATAAAGAAATACACAAATGAAACCAAATGTAGAATCTGGACGTATCAATCTGAATGGACCTCTTGGTGGTCATCATGGTTT
TTGCCCTCCCGTTACCAGGAGATGCACCTCAGGAATGACCGGCAGCTCCGGCTTCAGTGGCCGGCGCTTTCTTCCGGCTGTGGTGGTTGATCAGGTTTTG
GCGGCATATCGGGATTGGGTCTTGGTGGTTGGTCAGGCCTTGGTGGCCCATTAGGATTAGGTTGTGGCGGCTGGTCAGGTTTCGGTGGCCCATTAGGATT
GGGCTGTGGAGGTTGGTCAGGTTTCGGTGGCCCATCAGGACAAGGCTGGGGTGGTTGGTCGGGCATTGGTGGCATATCAAGATTAGGCAGTGGTGGCCCA
TCAAGTTTTGGTTGTGGTGGTTGGTTAGGGATCGATGGCCCGTTTGGATTGGGTTGTGTTGATTGGTCAGGCACCGATGGCGCATAAGGATTGGGTGACC
CATCAGGTTTAGGCATTGGCGGCATATCAGGCTTCGGTGGCCCATTAGGAATGGGTTGTGGTGGTTGATCGGGCTTTGGCGGCACATTAGGATTAGGCTG
TAGTGGCCCATCGGGTTTAGGTTGTGGTGGTTGATCAGGACAAGGCTGTACGGGGGGAATGGGTGGCCCATCGGGTTTAGCCATCGGCGGCACATCGGGC
CTATTCATCGGTG