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Detailed information on CNT30596296


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-160

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693916Oryza meridionalisOryza sativa99.0691.3695.091364forward
CNT30641270Oryza meridionalisNymphaea colorata83.0857.2983.571144forward
CNT30191758Oryza meridionalisSecale cereale79.3871.7786.461093forward
CNT30553671Oryza meridionalisOryza glaberrima79.5994.2491.241096forward
CNT30311152Oryza meridionalisCamelina sativa80.168.3883.141103forward
CNT30140803Oryza meridionalisLolium perenne83.4464.1987.551149forward
CNT30229013Oryza meridionalisAnanas comosus82.9372.4285.031142forward
CNT30716337Oryza meridionalisMalus domestica golden77.1285.7184.841062forward
CNT30684712Oryza meridionalisTriticum urartu83.2244.7888.131146forward
CNT30348745Oryza meridionalisEragrostis tef80.6199.9184.951110forward
CNT30370352Oryza meridionalisOryza glumipatula80.0393.0790.561102forward
CNT30110940Oryza meridionalisOryza longistaminata98.6950.1196.911359forward
CNT30576485Oryza meridionalisOryza barthii63.5493.8891.77875forward
CNT30116770Oryza meridionalisOryza nivara97.7596.2895.251346forward

Expression of CNT30596296

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MTQQMFEQQYSTFKRTRWSTTKQSRRHKQHKESFHEDNADTG*

>peptide 2 (40 aa)
MVSEDSTSRVIVLPVKVLTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (52 aa)
MSLCWSGGMPSLSWIFAFTLSMVSELSTSKVIVLPVRVLTKICIPPLRRRTR*

>peptide 4 (52 aa)
MSLCWSGGMPSLSWIFAFTLSIVSDDSTSSVMVLPVRVFTKICIPPLRRRTR*

>peptide 5 (49 aa)
MRRCWSGGIPSLSWILAFTLSMVSEDSTSRVMVLPVRVFTKICICKNVY*

>peptide 6 (48 aa)
MKGGLLLDVVVGEGPAILQLLASEDESLLVWGDALLVLDLRLHVVNRV*

>peptide 7 (37 aa)
MVSELSTSRVMVLPVRVLTKICIPPLRRSTKCRVDSF*

Sequence

>CNT30596296
ATTTGGAATGGAGGGAGTACTTATTAATTAGGTTAAACTGTTATGACCCAGCAAATGTTCGAACAGCAGTACAGCACATTTAAACGGACTCGATGGTCCA
CTACGAAACAAAGCAGACGGCACAAACAGCATAAAGAAAGTTTTCACGAGGATAACGCGGACACAGGATAACAGTACAGCAGCAATTCCATCAATGGTTA
CTGACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAG
ATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTAATGGTCT
TGCCAGTGAGAGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCG
GCCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCT
GAGCTCTCAACCTCCAAGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATTCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCT
TCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGTCTTTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGAT
CTTCGCCTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATCCCTCCCCTGAGG
CGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGT
CCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTT
GACAAAGATTTGCATGCCTCCCCGAAGGCGGAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGC
TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAA
GGGTTATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCATCTGCAAGAATGTATATTAACCATGGTAAGTCTCC