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Detailed information on CNT30596274


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000348, E-value = 5e-127

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691142Oryza meridionalisOryza sativa57.9614.1594.44324forward
CNT30115577Oryza meridionalisOryza nivara58.1426.997.23325forward

Expression of CNT30596274

Peptides detected in this lncRNA

>peptide 1 (47 aa)
LLFELLEMVKEHSLCSNGFIYALGAITCLAVLRNMQLLIPSIIKIWF*

>peptide 2 (32 aa)
MNMMGICELKYVKCDFIPWVASGVHMVLVAYQ*

Sequence

>CNT30596274
TTGCTGTTTGAACTCCTAGAAATGGTTAAAGAACACTCTTTGTGCTCAAATGGGTTTATATATGCTCTAGGTGCAATTACTTGCTTAGCCGTGCTTAGAA
ATATGCAATTGCTCATTCCATCTATAATTAAAATATGGTTTTGATACTTGAACCTTTGCTGGAATAAAATGAATATGATGGGTATTTGTGAACTAAAATA
TGTAAAATGTGATTTTATACCTTGGGTGGCAAGTGGTGTGCATATGGTGTTAGTTGCATACCAGTAGGGGGAGTGTTTGCCCAAGTCCATAAGGACCGAA
CTTGTGTCACCCATTTAAAGTTATNNNNNNNNNNNNNNNNNNNNNNTAGGGGGAGTGTTTGCCCAAGTCCATAAGGACCGAACTTGTGTCACCCATTTAA
AGTTATACGTACATCTACATGTGCTAGTATGGGATGGCCTAAGCTGATTAATATATTTAGGACTAGCCTTGCATTCTGGTAGGCCGGTGAGTATGAGTTC
GTATAATTCAGAGGAGCTTCCTATTTACCCCGACGTGGTAGTTTAGGTGACTAAGCGTG