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Detailed information on CNT30596265


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521026Oryza meridionalisSetaria italica47.229.6596.61118forward
CNT30374269Oryza meridionalisArabidopsis thaliana4222.4484.76105forward
CNT3044735Oryza meridionalisPrunus dulcis34.817.1690.887forward
CNT30589954Oryza meridionalisMusa acuminata5023.2886.4125forward
CNT30553864Oryza meridionalisOryza glaberrima607.5299.33150forward
CNT30246688Oryza meridionalisAvena sativa2810.492.8670forward
CNT30370304Oryza meridionalisOryza glumipatula37.66.7610094forward
CNT30104905Oryza meridionalisOryza longistaminata42.414.29100106forward
CNT30149311Oryza meridionalisBrachypodium distachyon46.454.4697.41116forward
CNT30101731Oryza meridionalisOryza rufipogon6019.0699.33150forward

Expression of CNT30596265

Peptides detected in this lncRNA

>peptide 1 (68 aa)
IGLSEMPLEVSRIWMSTSRVASNATAASCSATPRTRATAREEQKAMWTMVREIGKGQLYILGSRMYLL*

>peptide 2 (82 aa)
DWVERDALGGEQDLDEHEPRGLERHRGELQRHPADKGDGEGGAEGHVDHGEGDREGPVVHLGVEDVLVVDDDGEGEEDPDADV

Sequence

>CNT30596265
TGATTGGGTTGAGCGAGATGCCCTTGGAGGTGAGCAGGATCTGGATGAGCACGAGCCGCGTGGCCTCGAACGCCACCGCGGCGAGCTGCAGCGCCACCCC
GCGGACAAGGGCGACGGCGAGGGAGGAGCAGAAGGCCATGTGGACCATGGTGAGGGAGATCGGGAAGGGCCAGTTGTACATCTTGGGGTCGAGGATGTAC
TTGTTGTAGACGATGACGGCGAAGGAGAGGAAGATCCAGACGCCGACGTA