Detailed information on CNT30596253


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002032, E-value = 1e-121

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691892Oryza meridionalisOryza sativa14.0544.7999.26271reverse complement
CNT30104233Oryza meridionalisOryza rufipogon5.6531.599.08109reverse complement

Expression of CNT30596253

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MPSSNRSPTTNVPGSGTIVAHMTHLPTIVAFPIISCNVC*

>peptide 2 (38 aa)
MPIFNKFSSKSFISPLVTTEEASTTSFPTPEDISPPPF*

>peptide 3 (79 aa)
MLGSPYQKVLHNSLVKNNPPLLLSTSVGLSYTNSNNFCSPPTSTHLASILVSLRIPLLHSSDLSCPSSTNSLANLSYHP*

>peptide 4 (53 aa)
MYADLIGFVPLINLNLISSCTIAEMASSIVGNVAWWNIAALLSSNSLFNPFKK*

>peptide 5 (50 aa)
MSICRCKCLCLSTFTHLGVVGEVTKVSGGVRALIGLVLLPFLPLCHLFTY*

Sequence

>CNT30596253
TGCTCCTGAGTCTATGATCCAATCTATAGGATGTCTATATGTAGATGCAAGTGCCTGTGCCTGAGTACCTTCACCCACTTGGGCGTAGTTGGCGAAGTTA
CCAAAGTGAGTGGTGGTGTTAGAGCTCTCATTGGTCTTGTTCTTCTGCCATTCCTCCCATTGTGTCACTTGTTCACCTATTAGGGTAACAGCTTTCCCAT
CCTCCTTAACTGCATTGGCCTGAGGAACACCTCTGCCCCTACCACGACCTCCAACACGACCTCCACGATCACCTCCTCTACCACCACGATTTCCCCCAAA
AACACCACGGTCTCCTCTAAATCCACCACGAGTTCCACCATGCCCTCCTCGAATCGATCCCCTACCACCAATGTTCCGGGAAGTGGGACAATTGTAGCTC
ACATGACCCACTTGCCCACAATTGTAGCATTCCCTATTATCAGCTGCAATGTATGCTGATCTTATAGGATTTGTACCTCTCATCAACCTCAATCTCATCT
CTTCTTGCACCATTGCTGAAATGGCCTCTTCCATAGTGGGCAATGTAGCTTGGTGGAACATAGCTGCTCTCCTATCCTCAAACTCCTTGTTCAACCCCTT
CAAGAAATGAATGACTCTTCGCCTCTGCAGCCATTTATTTCCAATCACAATGTCATCCTCATGTTTCAATTGTAGGGGATCATAGTGATCAAGATCTGCC
CATAACTGTTGCAGCTCGCTAGCGTACTCTTGGACTGTTCTCCCCTCTTGCTTCAAATTCTCCACTTTGTTTTGAGCCTCAACCATCATCATTACATTTC
CCTCTCCTGAATACATGTTGCTCAGCGTCTTCCATACAACTGCAGCATTCTAGATAGCTTCTATCATCCTACCAATAGAAGGAGCCACCGAGGTCATCAA
CCAAGATACCACAGTGGAATTTGTAGTATTCCACGTCCTCCATGCTTGGCTCTCCTTATCAGAAGGTTCTTCACAACTCTCTAGTAAAAAATAATCCACC
CCTTTTGCTCTCAACATCAGTTGGGCTCTCCTACACCAACTCAAATAATTTTTGCTCCCCTCCAACCTCAACTCATTTGGCATCAATTCTAGTTTCACTT
CGAATCCCCCTGCTACACTCTTCGGACCTATCATGCCCATCTTCAACAAATTCTCTAGCAAATCTTTCATATCACCCTTAGTAACCACCGAGGAGGCATC
TACAACCTCCTTTCCAACCCCTGAAGACATTTCCCCTCCCCCTTTCTAAGCTTCCTTAGTCCTCACCTGCTACTGCTCTCTGCTCCTGTAATTTTTCAGC
ACACAAGACACTACCAACAACAAGCAACAGCAACCTTCTCCTCTCTTTTCCCTTCTCTCCACAGCAGCAGTCCACCAAACAAGCAATAGCAGCAGCAAAC
AGCAGTCCCTTCTCTCCACAGCAGCAGCAAACAGCAAGCAGTAGCAGCCGCAAATAGCAAACAACAAGCAACAGCAGCAGCAAACAGCAGCCGGTGCCCT
TCTTGTCGTCCTCCGTGCCGGCGCAGCAACCAGCCGCGGCGGGGTAGCAACAGCAAGCAACAGCGGCCAGCCGGCTCACCTGGTCGCAGCTCCGCCACCA
CTCCTGCGCCGTCGCCCCCACGCCACGGCCGCGCGACCGGCCGACCACCCCGGCACGCCGCTCAGCCGCTGTCGCCGTAGGTCGCGCCGCCACCTCGCGA
GTCCCAGCGGTCGCCTCCACACCGTCTTCCACTTCGTCCTGCTCCGGCACGAGCGCCGCCGCCGGCTAGGGTTTTGCCGCCGCTGGTCGCCAGGAGCTCG
GCTCTGATACCATATTGTTCAATTTGGGGAATTTTTCTAGGGTTAGCCTACTCAGCTCACCCCTTCCTCATCTATTCTATTAGCATAACACTTTACAGAT
AGGTCCTTGGTACAATACATATTTACACC