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Detailed information on CNT30596172


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30720699Oryza meridionalisTriticum spelta28.9752.987.74155forward
CNT30365616Oryza meridionalisSorghum bicolor13.6428.2991.7873forward
CNT30116554Oryza meridionalisOryza nivara43.3624.6599.57232forward

Expression of CNT30596172

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MVIVETYIKFNILESNRYLGWGGAPAAGAALASLQNLGLFWRRWWRRRRCRGGYFFLWSRATVPSFLATTTEVAMPRNMPCSTTPVIRRRRPS*

Sequence

>CNT30596172
CTTGATATTACCATGGATCAAAAGTCCACAAGTTATTAGCTTCGTCCATTGATAGCATCACTCAAGAACATTACCATGAAAAAAAGAGAGAAATCATGGT
AATAGTAGAGACGTACATCAAGTTCAACATACTAGAGAGCAATAGATACTTGGGTTGGGGAGGGGCACCAGCTGCTGGGGCTGCCCTCGCTTCGCTGCAA
AATCTTGGTTTATTTTGGCGTCGGTGGTGGCGCCGCCGCCGCTGCCGGGGCGGCTATTTCTTCTTGTGGAGCAGGGCGACGGTGCCGTCCTTCTTGGCAA
CGACCACCGAGGTGGCCATGCCGAGGAACATGCCGTGCTCGACGACGCCGGTGATCCGTAGGAGGCGACCGTCCTGAGCCTCGCGCTGAAGCCAGGCAAT
CCGTCGAACACCTTGCGGACGAGGCCCAGAGTGTGGTCGCACCCGAAGGGGACAACCTCGACGGGGACGGCGCCCGTACAGCCGAGCCGCGGGACGAGCT
TGGACTCATCGACGATGACGACGAACCTTCCCCCG