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Detailed information on CNT30596159


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004845, E-value = 2e-125

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30680899Oryza meridionalisTriticum urartu35.736.8789.73146forward
CNT30720672Oryza meridionalisTriticum spelta31.0524.189.76127forward
CNT30349408Oryza meridionalisEragrostis tef42.7915.8888.57175forward
CNT30584364Oryza meridionalisEchinochloa crusgalli26.8921.9689.09110forward

Expression of CNT30596159

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MGWRAWKSLRISSGFLGFAALLRGLFSSAGACATCFWNMANIFFFFL*

Sequence

>CNT30596159
GTTTCAATCACCTTAATTATTCGGATTCATTGCTAATTCATCGATCTTTTTACCTCTCGTAGCCAGAGAGGCCATTGCGGGCGTGGCCGGCGACGCAGGC
GAGGGCGGCGCCGCCGCCGAAGGAGGTGGAGAAGGCCTCGATGGGGTGGAGGGCGTGGAAGTCCCTGAGGATCTCGTCGGGGTTCTTGGGCTTCGCCGCG
CTGCTCCGCGGGCTGTTCAGCTCCGCCGGCGCGTGCGCCACCTGCTTCTGGAATATGGCCAACATTTTCTTCTTCTTCCTCTAGCTCCGACGAATCAAAC
TCCGGCGCCGACGAAGACGAAAGAACACGTAGTACTTTGCTTAGCTTAGCTTGAGCTGCTGCTGCTGTTCGTTGCGTGAAGATGAGAGACGTGAGGATAG
AGATGTGCG