Detailed information on CNT30596149


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729499Oryza meridionalisCorchorus capsularis30.094.9589.52105forward
CNT3098127Oryza meridionalisSolanum tuberosum30.0930.5290.48105forward
CNT30225649Oryza meridionalisHordeum vulgare31.5249.3399.09110forward
CNT30686102Oryza meridionalisTriticum urartu46.1323.9996.89161forward
CNT30104748Oryza meridionalisOryza rufipogon65.916.41100230forward

Expression of CNT30596149

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLEQEDAFKSIYYDQRGCSYFIFFFQADALLIKEESTH*

>peptide 2 (39 aa)
SSLEMELECWSKKTHSSRSITTSAVVRISFSSSKPTLFL*

>peptide 3 (63 aa)
PPLKWNLNAGARRRIQVDLLRPARLFVFHFLLPSRRSSYKRRKHSLNYLLNLVLLFDPFIFPF*

Sequence

>CNT30596149
GTCCTCCCTTGAAATGGAACTTGAATGCTGGAGCAAGAAGACGCATTCAAGTCGATCTATTACGACCAGCGCGGTTGTTCGTATTTCATTTTCTTCTTCC
AAGCCGACGCTCTTCTTATAAAAGAAGAAAGCACTCACTGAATTACTTACTGAATCTCGTCCTACTTTTTGACCCATTTATTTTTCCTTTCTAGGTTGGT
GGGCGCTTTCACCATTCAGCCATGGATGCTTTAGCGAGTGAACTAGGTTTTTAGTGGTATTCCTTCTCGAGCTTCTATTTCTTCCGTTAAGGGAGATTCG
GGAAAAGATGGAATAGGAAGACGTGTTTCCAGAACGAACAAGATACGGG