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Detailed information on CNT30596071


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693167Oryza meridionalisOryza sativa86.3273.8794.51328forward
CNT30674846Oryza meridionalisSetaria viridis32.8924.4191.2125forward
CNT30222634Oryza meridionalisHordeum vulgare19.7423.7390.6775forward
CNT30456759Oryza meridionalisSaccharum spontaneum29.7424.1591.15113forward
CNT304942Oryza meridionalisZea mays25.7927.6890.8298forward
CNT30101341Oryza meridionalisOryza rufipogon86.5874.2794.53329forward
CNT30576149Oryza meridionalisOryza barthii86.5867.1494.53329forward
CNT30604008Oryza meridionalisOryza punctata37.1141.2397.16141forward

Expression of CNT30596071

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MRGRRAHWSSLSSVTNLPVPGLMAAKKKKRMLKRRSGSISLMGTPVSMLSCASAEDAVLHHRLLLVQRRRR

Sequence

>CNT30596071
GATTGATTGTTGTGTCCTGAATTTTTACTACTCCGTATATATATGCATATAAGTAGATACTACTCCACCACAGTACAGAGGAGAGGATTGACATTGACTA
GCTAGTCCACTTAACCGTCTACTTACTACTATCAGAAGCTAATTTAATTAAGTGGAGTAAAAGCAAAATGAGGGGGCGGCGGGCTCATTGGTCGTCGTTG
TCGTCGGTGACGAACTTGCCGGTTCCGGGGTTGATGGCGGCGAAGAAGAAGAAGAGGATGTTGAAGAGGAGGAGCGGCTCGATCTCGTTGATGGGGACGC
CGGTCTCGATGTTGAGCTGCGCCAGTGCCGAAGATGCCGTCCTCCACCATCGACTTCTTCTTGTTCAACGACGACGACGA