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Detailed information on CNT30596036


BLAST search results

BLAST vs Swiss-Prot:
sp|P05494|ATPAM_MAIZE, E-value = 1e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618998Oryza meridionalisSesamum indicum53.168.7788.81143forward
CNT30200883Oryza meridionalisPisum sativum53.169.8691.61143forward
CNT30194088Oryza meridionalisSecale cereale53.1614.5898.6143forward
CNT30220384Oryza meridionalisHordeum vulgare25.2824.9194.1268forward
CNT30212621Oryza meridionalisHelianthus annuus53.168.1992.31143forward
CNT30684056Oryza meridionalisTriticum urartu53.165.9998.6143forward
CNT30571978Oryza meridionalisVitis vinifera53.163.188.81143forward
CNT3059064Oryza meridionalisAmborella trichopoda23.422.2690.4863forward

Expression of CNT30596036

Peptides detected in this lncRNA

>peptide 1 (37 aa)
IELIVPQSSIFVQSQHRHNTMSHSHLCPLSSFAFGLI*

Sequence

>CNT30596036
ATTGAACTAATTGTGCCACAGTCGAGCATTTTTGTCCAATCGCAACATAGACACAATACAATGTCTCACTCTCATTTGTGCCCCTTGAGTTCATTTGCTT
TTGGTTTAATATAGTATCGATAGCTATTGCTGTTTTTCCAGTTTNTTTGTGCCCCTTGAGTTCATTTGCTTTTGGTTTAATATAGTATCGATAGCTATTG
CTGTTTTTCCAGTTTATCTGTCCCCGATTATAAGTTTTCATTGACCACGGCCTATAGGAACCAGACTAA