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Detailed information on CNT30596021


BLAST search results

BLAST vs Swiss-Prot:
sp|Q75KD7|AOC_ORYSJ, E-value = 2e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553135Oryza meridionalisOryza glaberrima97.7166.6298.29469forward
CNT30361694Oryza meridionalisSorghum bicolor38.5483.7196.22185forward

Expression of CNT30596021

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GGNKYLVLDSSSSSVIRYTPHIVAINNKLIRQLDLHLHQLLAE*

>peptide 2 (28 aa)
MASYRSPLRSGTCWIRMQIPAEIPSRLSR

Sequence

>CNT30596021
GGAGGAAACAAATATCTTGTCCTCGATTCCTCTTCCTCATCAGTGATACGATACACACCGCACATTGTCGCAATTAACAATAAACTAATCAGGCAGCTCG
ATCTGCATCTCCATCAATTATTGGCAGAGTAGTAAACAGTAGCAATTGGAACTTGGCAGTGATGTACAACGCGGGTTGAGCTAGTTGGTGAAGTTGTTGA
GGCAGGCGTGGGGCTCGGTGGCCTTGGCGGCCGGCGTTGGCTCGACGGTCGGGGACGGCGGGACGGGCGTGCAGAGCAGCTCCCGCGGCAGGTCGGGGAT
GCCCTTGAGGTAGAAGGTGTAGAAGATCTTGAAGGGGAAGACGATCTGGTTGAGCTTGACCTGGCCGTAGTCGCCGAAGTAGAAGCTGTAGATGGCCTCG
TATCGGTCGCCGTTGCGCTCCGGCACGTGCTGGATCAGGATGCAGATCCCCGCCGAGATCCCCAGCCGCTTGTCCAGGCT