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Detailed information on CNT30595990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522318Oryza meridionalisSetaria italica59.1558.693.65126forward
CNT3046260Oryza meridionalisPrunus dulcis23.4716.849050forward

Expression of CNT30595990

Peptides detected in this lncRNA

>peptide 1 (70 aa)
VDAGGDAELLEDGEEVERVALEGGVAGEVEIVRVVRLLHDPHSFPFLRSSSRPDNTSSSSSSSSAPRGGVA

>peptide 2 (41 aa)
RCRRRRGAPGGWRGGRARSPRGWRSGRSRNSPGCAPPPRSP*

Sequence

>CNT30595990
GTAGATGCAGGAGGCGACGCGGAGCTCCTGGAGGATGGCGAGGAGGTCGAGCGCGTAGCCCTCGAGGGTGGCGTAGCGGGAGAAGTCGAAATAGTCCGGG
TTGTGCGCCTCCTCCACGATCCCCATAGCTTCCCTTTCCTCCGATCCTCCTCACGCCCGGACAACACCTCTTCTTCCTCCTCCTCCTCCTCGGCTCCTCG
TGGTGGCGTTGCG