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Detailed information on CNT30595970


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677823Oryza meridionalisSetaria viridis17.1728.1486.4974forward
CNT30441907Oryza meridionalisAegilops tauschii16.7128.2488.8972forward
CNT3078381Oryza meridionalisBrassica juncea23.237.4582100forward
CNT3041885Oryza meridionalisChlamydomonas reinhardtii23.224.5188100forward
CNT30368464Oryza meridionalisSorghum bicolor22.9712.0491.9299forward
CNT30116105Oryza meridionalisOryza nivara23.4313.6990.1101forward

Expression of CNT30595970

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MQQVVAHSTQAAADTATAKRERSIDRSGLVGGGGVVLLVVVVLGGGVLVLLVLGDEVSIMRSGYSSLILEMSSVPMPDPVPPPSEWHTW

Sequence

>CNT30595970
CACAGATGAAGATGAACACAATAGAATTTAGTCCCATGAAAATGAAGTAGATAACATTTCCTAACATATACAGAGATAGAAAAGAGTAAACCACGGTTCA
TGTACATGAATAAACAAATTTAGACAGACAAGAAACCTGAACAACGACGACGACGTACGAAGGCATGCAACAAGTAGTAGCGCACAGTACACAAGCAGCA
GCAGACACGGCAACGGCAAAGCGGGAGAGATCGATCGATCGATCAGGCCTCGTCGGCGGCGGCGGCGTCGTCCTCCTCGTCGTAGTCGTCCTCGGCGGTG
GCGTCCTGGTACTGCTGGTACTCGGCGACGAGGTCAGCATCATGCGGTCCGGGTACTCCTCCCTGATCTTGGAGATGAGCAGCGTGCCCATGCCCGACCC
CGTGCCTCCTCCCAGCGAGTGGCACACCTGG