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Detailed information on CNT30595962


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001393, E-value = 5e-165

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104232Oryza meridionalisOryza rufipogon33.4738.6199.38322forward

Expression of CNT30595962

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCPWEYVSRSGGTARPTRPACTGVTSGCS*

>peptide 2 (63 aa)
XXXRTLLTRPLTPVPPTLRPNVPLGVRESVRGYGTANPSCLYRCDLWLLLSVRLWSSSKLRGA*

Sequence

>CNT30595962
NNNNNNNNNTAGAACACTACTGACGAGGCCTCTTACCCCTGTCCCTCCTACCCTGCGCCCTAATGTGCCCCTGGGAGTACGTGAGTCGGTCCGGGGGTAC
GGCACGGCCAACCCGTCCTGCCTGTACAGGTGTGACCTCTGGCTGCTCCTGAGTGTGCGCCTCTGGAGCTCCTCCAAGCTGAGAGGAGCCTAGTACGTCC
TGGTGGTCTGCACCGTGTAAGTCGTCGTCGTAGAACTGGCTAGTAGGACCAGTCCTACCGGCGTGAGACGAAGAGGCCCCAGTACCGAAGATCCCGGCTG
CAAATCCTGCTGGACAAGGACCATCAGTTTCNTCCTGCCTGTACAGGTGTGACCTCTGGCTGCTCCTGAGTGTGCGCCTCTGGAGCTCCTCCAAGCTGAG
AGGAGCCTAGTACGTCCTGGTGGTCTGCACCGTGCAAGTCGTCGTCGTAGAACTGGCTAGTAGGACCAGTCCTACCGGCGTGAGACGAAGAGGCCCCAGT
ACCGAAGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCACCGTGCAAGTCGTCGTCGTAGAACTGGCTAGTAGGACCAGTCCTACCGG
CGTGAGACGAAGAGGCCCCAGTACCGAAGATCCCGGCTGCATATCCTGCTGGACAAGGACCATCAGATTCGTACAAGTATTTAGCAGTAGTAATAAAAAG
TAAAGTACCGTGTGGGCGAGGGAACGACGCTCCGTGAGAGGAAGAGCTGGCGAACGCGCCCGAAGAGGTGGCGAACGNCAGATTCGTACAAGTATTTAGC
AGTAGTAATAAAAAGTAAAGTACCGTGTGGGCGAGGGAACGACGCTCCGTGAGAGGAAGAGCTGGCGAACGCGCCCGAAGAGGTGGCGAACGGCCCTGCG
GAGCTCGCGGAAGCGCCGGTCGTGCCTGCGAACGCGCTCGAAGGCAGACGAGGTCCTGCGAT