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Detailed information on CNT30595954


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENW2|YCF3_SACOF, E-value = 1e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618958Oryza meridionalisSesamum indicum33.367.8691.1438forward
CNT3020650Oryza meridionalisCitrullus lanatus32.2224.3188.89423forward
CNT30730408Oryza meridionalisCorchorus capsularis31.1586.4788.51409forward
CNT30632297Oryza meridionalisVigna unguiculata32.6724.2687.65429forward
CNT30201080Oryza meridionalisPisum sativum32.4421.490.38426forward
CNT3094383Oryza meridionalisSolanum tuberosum8.8353.9589.66116reverse complement
CNT30194121Oryza meridionalisSecale cereale41.1360.3493.7540forward
CNT30171250Oryza meridionalisTrifolium pratense7.6927.6793.07101forward
CNT30598583Oryza meridionalisFraxinus excelsior17.9723.6991.1236forward
CNT30445979Oryza meridionalisSaccharum spontaneum26.5888.894.84349forward
CNT30232528Oryza meridionalisAnanas comosus40.4426.8391.53531forward
CNT30217417Oryza meridionalisKalanchoe fedtschenkoi26.3573.9391.62346forward
CNT30655373Oryza meridionalisRosa chinensis32.4410.1789.67426forward
CNT30627898Oryza meridionalisDaucus carota32.1413.7189.34422forward
CNT3022800Oryza meridionalisPopulus trichocarpa24.9896.4787.8328forward
CNT30332506Oryza meridionalisDioscorea rotundata33.9748.9691.03446forward
CNT30149145Oryza meridionalisBrachypodium distachyon40.4429.5794.54531forward
CNT30604206Oryza meridionalisOryza punctata15.2350.2596200forward
CNT30114189Oryza meridionalisFicus carica33.1311.0491.03435forward

Expression of CNT30595954

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MKFLIRSSDLIYLINGSTTKPPFYEKGEWSYSNSKRFVIFNQFCASI*

>peptide 2 (38 aa)
MISSFLYYLPSFYFFFSYSLEQLYIEVNLRQVFGSIMT*

Sequence

>CNT30595954
CAATTTTTTAGTGAACCTTTGAAAGATAGATATTATGATTAGTTCTTTTCTTTACTATCTACCATCCTTCTATTTTTTTTTTAGTTATTCACTGGAGCAA
TTATATATTGAAGTCAATCTGAGGCAAGTGTTCGGATCTATTATGACATAAGGATTGGGTGCCTAACGGACTTTTTTTTATCTTGGATTTCTCCACGTAA
CAAAAAAACCTTTTTTTAATTTAAAAAGCTAGTCTATTTTTTTTAAGAGTATAAGTCCCTATCTATATCTACTTTCCTTGAGCATAATATAGATTTTTTT
ATTCGATTCCAAATTCCAAGATAACTCATTAGAATTATTAATAAGATGGTCCTGATATATTAGCAATATTTATATTGCCCCTTTTTATTCGCTTTATTAC
TTCTATTCTAGACCCTATCGTTTATCCTTATGAAATATAATATAAAATAGAAGGCAGAGGAAAGAGATATAATGAAATTCTTGATTCGATCTTCCGACCT
AATTTATTTGATTAATGGATCAACAACCAAACCCCCATTTTATGAAAAAGGAGAGTGGTCTTATTCAAATTCAAAGCGCTTCGTAATCTTCAACCAGTTC
TGTGCTTCAATATAATTTCCCGGAGTAAGCGCTATAGCTTGTTTCCAATACTCAGCAGCTTGATCAAACCAAGCTTCTGCAATTTCTGAATCACCCTNTG
TGCTTCAATATAATTTCCCGGAGTAAGCGCTATAGCTTGTTTCCAATACTCAGCAGCTTGATCAAACCAAGCTTCTGCAATTTCTGAATCACCCTGTAGA
ATGGCCTGTTCTCCCCGGTCGGAATAGATCACGGCCATATTATTAAAAGCTTGTGGTAAGAAGGGGTTTCGTTCTAGTGCCCGGAAATAATATTCCAAAG
CCTTTGTATGCTCTCCATTGCTTGTGTGTATAAGGCCTATGTTATAGAGTATATAACTTCGATCATAGGGATCAATTTCTAGTCGCGTAGCTTCATAATA
ATTTTGCAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCAACATCCGTTACGGTCGTTCGTTCTATTCAAAAAATCTCCGTTCCAAAACCGTACATGAG
GTTTTCACCTCATACGGCTCCTCCCTTCTGTACATAGTACTAAGCGAAAAAATCTAGAGAATAAAAATAGAATTAGTTCCATCTCATTATGGACCGAAAG
GGGCTGGTATTTTTCCAAGAAATCTCTAGNTTCGTTCTATTCAAAAAATCTCCGTTCCAAAACCGTACATGAGGTTTTCACCTCATACGGCTCCTCCCTT
CTGTACATAGTAC