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Detailed information on CNT30595951


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H8T0|RGP1_ORYSJ, E-value = 8e-47

BLAST vs NONCODE:
NONMEST001700, E-value = 5e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692499Oryza meridionalisOryza sativa73.4929.198.1158forward
CNT30678104Oryza meridionalisSetaria viridis43.2611.6796.7793forward
CNT30278778Oryza meridionalisChenopodium quinoa61.426.5684.09132forward
CNT30182054Oryza meridionalisSecale cereale49.7735.4383.18107forward
CNT30538004Oryza meridionalisBrassica napus32.569.9288.5770forward
CNT30683583Oryza meridionalisTriticum urartu42.7923.1793.4892forward
CNT30361540Oryza meridionalisSorghum bicolor67.4433.2691.03145forward
CNT30575864Oryza meridionalisOryza barthii46.0514.7897.9899forward
CNT3050887Oryza meridionalisCucumis sativus96.7472.9879.81208forward

Expression of CNT30595951

Peptides detected in this lncRNA

>peptide 1 (70 aa)
SIIVRDVKPQAVRDSSLGTLPEAEGVPTDKVSAFTVGIIQGVEEERGGRAEEVLDVLLKSIDVLARWVLGN

Sequence

>CNT30595951
GGAGCATCATAGTCAGGGATGTTAAGCCACAGGCCGTGAGAGACAGCAGTCTTGGCACCCTCCCTGAGGCTGAAGGGGTACCCACGGACAAAGTCAGCGC
CTTCACGGTAGGGATCATACAAGGTGTTGAAGAAGAACGGGGTGGACGGGCTGAGGAGGTTCTTGATGTGCTGCTCAAGAGCATTGATGTCCTTGCCAGA
TGGGTCCTTGGCAAC