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Detailed information on CNT30595897


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002948, E-value = 1e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30496834Oryza meridionalisDigitaria exilis22.811.7991.6760forward

Expression of CNT30595897

Peptides detected in this lncRNA

>peptide 1 (67 aa)
LIGLIEYSYQQVATSFPEANLQRTPGVLGLEQFGMGDRPGNSSRVHTSEDKVCRKDMCWSVRAVYDL*

>peptide 2 (36 aa)
LNRINRILISTSCNFFSGSQSPKNSRRAWPGAIWDG*

Sequence

>CNT30595897
GCTTAATAGGATTAATAGAATACTCATATCAACAAGTTGCAACTTCTTTTCCGGAAGCCAATCTCCAAAGAACTCCAGGCGTGCTTGGCCTGGAGCAATT
TGGGATGGGTGACCGACCGGGAAATTCTTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGAGGGCAGTCTATGAC
CTATGAAAGCTATCAGATGTAAGTGGGCCCGGCCTGGGGAAGGCGGGACGTTACACAAATGTA