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Detailed information on CNT30595881


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689226Oryza meridionalisTriticum urartu44.1524.4392.72453forward
CNT30103542Oryza meridionalisOryza rufipogon44.1563.8999.78453forward

Expression of CNT30595881

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAGSGPFLKRCFYRIPIHNNFYFWFRRTNHH*

>peptide 2 (63 aa)
VVSGPLAIVLEKWPGLAHSSKDVFTGSLSTTIFTSGSGERIIIKSSSFRTRHTKRPANFLVNL*

>peptide 3 (47 aa)
MKFLIRSSDLIYLINGSTTKPPFYEKGEWSYSNSKRFVIFNQFCASI*

>peptide 4 (38 aa)
MFLQDPYPQQFLLLVPANESSLSPPLSGQDIQRDPPTF*

Sequence

>CNT30595881
GGTAGTATCAGGGCCCTTAGCTATTGTTCTTGAGAAATGGCCGGGTCTGGCCCATTCCTCAAAAGATGTTTTTACAGGATCCCTATCCACAACAATTTTT
ACTTCTGGTTCCGGCGAACGAATCATCATTAAGTCCTCCTCTTTCCGGACAAGACATACAAAGAGACCCGCCAACTTTTTAGTGAACCTTTGAAAGATAG
ATATTATGATTAGTCCTTTTCTTTACTATCTACCGTCCTTCTATTTTTTTTTAGTTATTCACTGGAGCAATTATATATTGAAGTCAATCTGAGGCAAGTG
TTCGGATCTATTATGACATAAGGATTGGGTGCCTAACGGACTTTTTTTTATCTTGGATTTCTCCACGTAACAAAAAAACCTTTTTTTAATTTAAAAAGCT
AGTCTATTTTTTTTAAGAGTATAAGTCCCTATCTATATCTACTTTCCTTGAGCATAATATAGATTTTTTTATTCGATTCCAAATTCCAAGATAACTCATT
AGAATTATTAATAAGATGGTCCTGATATATTAGCAATATTTATATTGCCCCTTTTTATTCGCTTTATTACTTCTATTCTAGACCCTATCGTTTATCCTTA
TGAAATATAATATAAAATAGAAGGCAGAGGAAAGAGATATAATGAAATTCTTGATTCGATCTTCCGACCTAATTTATTTGATTAATGGATCAACAACCAA
ACCCCCATTTTATGAAAAAGGAGAGTGGTCTTATTCAAATTCAAAGCGCTTCGTAATCTTCAACCAGTTCTGTGCTTCAATATAATTTCCCGGAGTAAGC
GCTATAGCTTGTTTCCAATACTCAGCAGCTTGATCAAACCAAGCTTCTGCAATTTCTGAATCACCCTNTGTGCTTCAATATAATTTCCCGGAGTAAGCGC
TATAGCTTGTTTCCAATACTCAGCAGCTTGATCAAACCAAGCTTCTGCAATTTCTGAATCACCCTGTAGAATGGCCTGTTCTCCCCGGTCGGAATAGATC
ACGGCCATATTATTAAAAGCTTGTNA