Detailed information on CNT30595868


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10J20|D14L_ORYSJ, E-value = 3e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30128428Oryza meridionalisCorymbia citriodora55.839.1288.81134forward
CNT30361592Oryza meridionalisSorghum bicolor54.5817.7590.84131forward

Expression of CNT30595868

Peptides detected in this lncRNA

>peptide 1 (79 aa)
PGRGGEEDELGEEVGAGDGGDGADDGGDGVADVDAGGDAELLEDGEEHHAVVGHQVRHQVLPHRLVRPEPVRQHDHPALP

>peptide 2 (32 aa)
RGEAERRTSLEKRSGREMEAMAPMTAETEWPT*

Sequence

>CNT30595868
CCGGGGCGAGGCGGAGAGGAGGACGAGCTTGGAGAAGAGGTCGGGGCGGGAGATGGAGGCGATGGCGCCGATGACGGCGGAGACGGAGTGGCCGACGTAG
ATGCAGGAGGCGACGCGGAGCTCCTGGAGGATGGCGAGGAGCACCACGCGGTAGTCGGCCACCAGGTGCGGCACCAGGTGCTTCCACACCGACTGGTCCG
TCCCGAACCCGTGCGCCAGCACGATCATCCCGCGCTTCCC