« Back to Oryza meridionalis search


Detailed information on CNT30595843


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H6W9|LRR1_CAPAN, E-value = 1e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30556133Oryza meridionalisOryza glaberrima87.6460.8886.56305forward
CNT30603678Oryza meridionalisOryza punctata33.3311.1982.76116forward

Expression of CNT30595843

Peptides detected in this lncRNA

>peptide 1 (30 aa)
NLLLLRLMVTRFVHSPKDDGSSPDKLLLLM*

>peptide 2 (37 aa)
MMSAPLIVPCKPLLAKERYSNEMALKRSYGRVPMMLL*

Sequence

>CNT30595843
AACTTGTTGCTGCTGAGGTTGATGGTTACTAGATTTGTGCACTCGCCCAAGGATGATGGCAGCTCTCCAGATAAGTTGTTGCTGCTCATGTGAAGCTCCT
CTAGCCTCTTTAGCTGGCCAATAGAATTTGGGATCTTGCCACTGAATCTATTCCATCCAAGATCAACAAAAACAAGATTACGTAGCTTTATGATGAGCGC
ACCATTAATTGTTCCTTGCAAACCATTGTTAGCAAAAGAGAGGTACTCCAATGAGATGGCACTGAAGAGATCATATGGCAGGGTCCCAATGATGTTGTTG
TGACCAGCCTTTAGCATTCTAAGGGAACAGCATTTACCTATCCCATGG