Detailed information on CNT30595838


BLAST search results

BLAST vs Swiss-Prot:
sp|P26302|KPPR_WHEAT, E-value = 2e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372685Oryza meridionalisArabidopsis thaliana30.7137.7281.58152forward
CNT30708150Oryza meridionalisGlycine max49.945.5786.64247forward
CNT30145996Oryza meridionalisMedicago truncatula48.8959.1780.99242forward
CNT30364562Oryza meridionalisSorghum bicolor39.3920.6886.15195forward
CNT30369615Oryza meridionalisOryza glumipatula67.2760.2299.7333forward
CNT30644238Oryza meridionalisCannabis sativa36.3667.6782.78180forward
CNT30114771Oryza meridionalisEutrema salsugineum27.0735.0885.07134forward

Expression of CNT30595838

Peptides detected in this lncRNA

>peptide 1 (30 aa)
TCSYMRSKSFALGSRAVTPFSFLPVLSKEW*

>peptide 2 (50 aa)
MSVFESGLPPLGGSAAPPNTLVSRRMKVLFPHPESAARPITTGLSIEHET*

>peptide 3 (35 aa)
MTWFCLKLVLVVHGECREVERIVGIELGEHKEERG*

>peptide 4 (46 aa)
HLLIHEIKIVCPRVQGSHTFLLPASPVQGMVVIEAYHRCRVTDECV*

Sequence

>CNT30595838
TCACCTGCTCATACATGAGATCAAAATCGTTTGCCCTAGGGTCCAGGGCAGTCACACCTTTCTCCTTCCTGCCAGTCCTGTCCAAGGAATGGTAGTCATC
GAGGCATATCACCGTTGTCGTGTCACTGATGAGTGTGTTTGAGTCTGGGTTGCCACCCTTGGGTGGCTCTGCAGCACCACCAAACACACTGGTGAGCCGG
CGCATGAAGGTGCTCTTCCCGCATCCTGAGTCTGCTGCAAGGCCAATCACCACTGGCTTGTCGATTGAGCATGAAACCTGAAAGGTTCTTGCTCCTCCGT
ACCTTGTGCTACCCCTCCTGTTGCTTCTGGTGGTGAAGAAGATGACCTGGTTCTGCCTGAAGCTTGTGTTGGTGGTGCATGGGGAGTGCAGGGAGGTTGA
AAGAATTGTGGGGATAGAGCTAGGAGAACATAAGGAGGAGAGAGGATGATGATGATGTGGTACCCCTTATTTTCCTTTCTTTTCTGATGATATCA