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Detailed information on CNT30595806


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-101

BLAST vs NONCODE:
NONTPRT002153, E-value = 6e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690948Oryza meridionalisOryza sativa99.3695.8398.55621forward
CNT30301827Oryza meridionalisTriticum aestivum73.1259.1292.56457forward
CNT30395844Oryza meridionalisTriticum turgidum73.1229.5492.56457forward
CNT30242975Oryza meridionalisAvena sativa72.9661.7992.54456forward

Expression of CNT30595806

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVNVFTK

>peptide 2 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICMPPLRRRTR*

Sequence

>CNT30595806
TTCATAAAGCATACTGCAGTCCCACAGGAAACTGTTTCATAAAACTAACATATCATACGGACTCGATGGTCCATTAAACCAGACACAAGTAGACATCAGC
ACCACAAATACTTGACGAACAGAGGCTCGGGACGAACAGGCACAGCGGCAGCTCCACCAAACTGGCTGATTACTGACCACCACGGAGGCGGAGCACCAGG
TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGC
CCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTG
CATGCCTCCCCTGAGACGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCAGCGAAA
ATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATTATCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCT
TGCCGGTCAATGTCTTCACAAAGAT