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Detailed information on CNT30595791


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30563605Oryza meridionalisActinidia chinensis13.7620.5186.697forward
CNT30552772Oryza meridionalisOryza glaberrima68.7949.0497.32485forward
CNT30364751Oryza meridionalisSorghum bicolor24.411.9494.77172forward
CNT30105771Oryza meridionalisOryza longistaminata46.3865.2797.25327forward
CNT30100504Oryza meridionalisOryza rufipogon71.2165.9797.61502forward
CNT30575453Oryza meridionalisOryza barthii75.8986.7196.82535forward
CNT30116097Oryza meridionalisOryza nivara86.3872.2496.88609forward
CNT30603705Oryza meridionalisOryza punctata69.552.9296.53490forward

Expression of CNT30595791

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MAVSLASTEAWSGPARWAPPRRRVGKLSRARSPRRRKAALS*

Sequence

>CNT30595791
ACATATAGTTACAGAAGCTACTGAATTTCCAACATGTAACAAGGGATTACAGCTTAATTCTCGACCGGCCGCGCCGTGAAAAAAACAACCGGCAGCTCAA
CCAGGAGATCAGATCACTGAGTACACCAACGACACTTGCACGACGACGTAATACCAACGACCTTACTACTACTGACTAGTTACTGCTACTCGCAGCAGCC
ATGGCCGACGTCTAAAATGCCACCGAGCCATGGAAGCCACGGAATTCAGAGAAGATTACACAGCTAGTTGAGTTGAGTGACTCTAGCTTGACGAAGACTA
CTACTAGTACTAGTAGTAGACTAGTAGCTGCTTCTGCTTGTTTATGAGAGGATTGAGTCCCAGTCGATCTCCCAGGACGGGTACTTGCGCAGGTGGAATG
TCTCCGACTCGTCCCATGGCGCCTCCGTGAAGTCCAGCTTCTCCATCTCCGGCACCGGGGGCGACAGCGGCGTGGGCGGAGGAGGGGAGCCGCTGACTCG
GCGGGGGTGTTCTTGGACGAGTTCGTGGCGAGGGACTGGCAGATGGCGGTGAGCTTGGCGTCGACGGAGGCGTGGAGCGGGCCGGCGAGGTGGGCGCCGC
CGCGGCGGAGGGTGGGGAAGTTGAGCCGCGCGAGGTCGCCGCGGAGGCGGAAGGCGGCCTTGTCGTAGGCGAGCGCGGCGTCCTCGGCGGTGTCGAAGGT
GCCAA