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Detailed information on CNT30595766


BLAST search results

BLAST vs Swiss-Prot:
sp|B6TVL4|CAS_MAIZE, E-value = 1e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691121Oryza meridionalisOryza sativa97.54102.2195.67277forward
CNT30666747Oryza meridionalisTriticum dicoccoides34.5123.2283.6798forward
CNT30689632Oryza meridionalisTriticum urartu34.5120.2183.6798forward
CNT30340732Oryza meridionalisEragrostis tef47.8934.6184.56136forward
CNT30100064Oryza meridionalisOryza rufipogon98.94102.1895.73281forward
CNT30575377Oryza meridionalisOryza barthii52.4668.3596.64149forward

Expression of CNT30595766

Peptides detected in this lncRNA

>peptide 1 (31 aa)
GIEMSLFFAFEGSCGTPALALSFSVLTSIST*

>peptide 2 (62 aa)
RDRDELVLRVRGELWHAGLGLVLLGPHIDQHVILRGHHVQSLCSGQEQVREERRSGDHDVVG*

Sequence

>CNT30595766
CGGGATAGAGATGAGCTTGTTCTTCGCGTTCGAGGGGAGCTGTGGCACGCCGGCCTTGGCCTTGTCCTTCTCGGTCCTCACATCGATCAGCACGTAATCT
TGCGAGGTCACCATGTCCAGAGCTTGTGCAGCGGTCAGGAGCAGGTACGCGAGGAACGCCGCTCCGGCGACCACGACGTAGTCGGCTGAGCCCAGCGAGC
CGATGGTCTCCACCGTCGCCGACGCGATGGGCTTCGCGGCGTCAATGACCTTCGTGCCCTGCTGCGCCGCGTCCGCGACGGTCT